RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ZNF250P15622 560 aa15.2■□□□□ 0.02
RAB39A-201ENST00000320578 CASP6P55212 293 aa15.2■□□□□ 0.02
RAB39A-201ENST00000320578 ERVK11-1P61568 191 aa15.2■□□□□ 0.02
RAB39A-201ENST00000320578 NKX6-1P78426 367 aaPredicted RBP15.2■□□□□ 0.02
RAB39A-201ENST00000320578 RGS7BPQ6MZT1 257 aaPredicted RBP15.2■□□□□ 0.02
RAB39A-201ENST00000320578 Q6ZS49 121 aa15.2■□□□□ 0.02
RAB39A-201ENST00000320578 WDR86Q86TI4 376 aa15.2■□□□□ 0.02
RAB39A-201ENST00000320578 NOXA1Q86UR1 476 aa15.2■□□□□ 0.02
RAB39A-201ENST00000320578 SLC25A42Q86VD7 318 aa15.2■□□□□ 0.02
RAB39A-201ENST00000320578 LHFPL1Q86WI0 220 aa15.2■□□□□ 0.02
RAB39A-201ENST00000320578 FAM58AQ8N1B3 248 aa15.2■□□□□ 0.02
RAB39A-201ENST00000320578 RELL2Q8NC24 303 aaPredicted RBP15.2■□□□□ 0.02
RAB39A-201ENST00000320578 OR13G1Q8NGZ3 307 aa15.2■□□□□ 0.02
RAB39A-201ENST00000320578 ZCCHC14Q8WYQ9 949 aaKnown RBP15.2■□□□□ 0.02
RAB39A-201ENST00000320578 MRGPRFQ96AM1 343 aa15.2■□□□□ 0.02
RAB39A-201ENST00000320578 SEC22CQ9BRL7 303 aa15.2■□□□□ 0.02
RAB39A-201ENST00000320578 TLNRD1Q9H1K6 362 aa15.2■□□□□ 0.02
RAB39A-201ENST00000320578 F8VVB4 439 aa15.19■□□□□ 0.02
RAB39A-201ENST00000320578 F8VWA3 439 aa15.19■□□□□ 0.02
RAB39A-201ENST00000320578 M0R1B8 84 aa15.19■□□□□ 0.02
RAB39A-201ENST00000320578 TIMM8AO60220 97 aaPredicted RBP15.19■□□□□ 0.02
RAB39A-201ENST00000320578 FCGR3AP08637 254 aa15.19■□□□□ 0.02
RAB39A-201ENST00000320578 ECI1P42126 302 aa15.19■□□□□ 0.02
RAB39A-201ENST00000320578 UBE2MP61081 183 aaKnown RBP15.19■□□□□ 0.02
RAB39A-201ENST00000320578 RPS23P62266 143 aaKnown RBP15.19■□□□□ 0.02
RAB39A-201ENST00000320578 CHRFAM7AQ494W8 412 aa15.19■□□□□ 0.02
RAB39A-201ENST00000320578 SCCPDHQ8NBX0 429 aa15.19■□□□□ 0.02
RAB39A-201ENST00000320578 ZNF431Q8TF32 576 aaPredicted RBP15.19■□□□□ 0.02
RAB39A-201ENST00000320578 PPA2Q9H2U2 334 aa15.19■□□□□ 0.02
RAB39A-201ENST00000320578 C12orf4Q9NQ89 552 aa15.19■□□□□ 0.02
RAB39A-201ENST00000320578 ANXA10Q9UJ72 324 aa15.19■□□□□ 0.02
RAB39A-201ENST00000320578 TMEM8BA6NDV4 472 aa15.18■□□□□ 0.02
RAB39A-201ENST00000320578 CSN2P05814 226 aa15.18■□□□□ 0.02
RAB39A-201ENST00000320578 ERP29P30040 261 aaKnown RBP15.18■□□□□ 0.02
RAB39A-201ENST00000320578 ZNF154Q13106 437 aa15.18■□□□□ 0.02
RAB39A-201ENST00000320578 SURF2Q15527 256 aaPredicted RBP15.18■□□□□ 0.02
RAB39A-201ENST00000320578 RIMS4Q9H426 269 aaPredicted RBP15.18■□□□□ 0.02
RAB39A-201ENST00000320578 ZNF701Q9NV72 531 aaPredicted RBP15.18■□□□□ 0.02
RAB39A-201ENST00000320578 ZNF581Q9P0T4 197 aa15.18■□□□□ 0.02
RAB39A-201ENST00000320578 ZNF230Q9UIE0 474 aaPredicted RBP15.18■□□□□ 0.02
RAB39A-201ENST00000320578 VSIG4Q9Y279 399 aa15.18■□□□□ 0.02
RAB39A-201ENST00000320578 MEMO1Q9Y316 297 aa15.18■□□□□ 0.02
RAB39A-201ENST00000320578 PIEZO1Q92508 2521 aa15.18■□□□□ 0.02
RAB39A-201ENST00000320578 SPTBN4Q9H254 2564 aa15.18■□□□□ 0.02
RAB39A-201ENST00000320578 OR2AT4A6NND4 320 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 MLNRO43193 412 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 IGHV3-13P01766 116 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 OR4E1P0C645 316 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 PGA5P0DJD9 388 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 PPP3CBP16298 524 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 CCKARP32238 428 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 GZMKP49863 264 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 TAS2R31P59538 309 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 ASB13Q8WXK3 278 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 CYYR1Q96J86 154 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 DMRTB1Q96MA1 342 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 NRIP2Q9BQI9 281 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 ZNF442Q9H7R0 627 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 ZNF69Q9UC07 566 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 OSGIN2Q9Y236 505 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 PRKACAP17612 351 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 CXCL3P19876 107 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 CA7P43166 264 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 FABP6P51161 128 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 TSPAN5P62079 268 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 PEG10Q86TG7 708 aaKnown RBP15.17■□□□□ 0.02
RAB39A-201ENST00000320578 RADILQ96JH8 1075 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 DHRS9Q9BPW9 319 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 HDHD3Q9BSH5 251 aaPredicted RBP15.17■□□□□ 0.02
RAB39A-201ENST00000320578 DECR2Q9NUI1 292 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 GPR132Q9UNW8 380 aa15.17■□□□□ 0.02
RAB39A-201ENST00000320578 IGLV3-9A0A075B6K5 115 aa15.16■□□□□ 0.02
RAB39A-201ENST00000320578 MCRIP1C9JLW8 97 aa15.16■□□□□ 0.02
RAB39A-201ENST00000320578 RHBDL1O75783 438 aa15.16■□□□□ 0.02
RAB39A-201ENST00000320578 PTBP3O95758 552 aaKnown RBP15.16■□□□□ 0.02
RAB39A-201ENST00000320578 FPR2P25090 351 aa15.16■□□□□ 0.02
RAB39A-201ENST00000320578 KCNJ8Q15842 424 aa15.16■□□□□ 0.02
RAB39A-201ENST00000320578 C4orf46Q504U0 113 aa15.16■□□□□ 0.02
RAB39A-201ENST00000320578 Q6ZR03 302 aa15.16■□□□□ 0.02
RAB39A-201ENST00000320578 TMEM185AQ8NFB2 350 aa15.16■□□□□ 0.02
RAB39A-201ENST00000320578 HS3ST6Q96QI5 342 aa15.16■□□□□ 0.02
RAB39A-201ENST00000320578 ZNF436Q9C0F3 470 aaPredicted RBP15.16■□□□□ 0.02
RAB39A-201ENST00000320578 RANBP3Q9H6Z4 567 aaPredicted RBP15.16■□□□□ 0.02
RAB39A-201ENST00000320578 ZNF286AQ9HBT8 521 aa15.16■□□□□ 0.02
RAB39A-201ENST00000320578 EHFQ9NZC4 300 aa15.16■□□□□ 0.02
RAB39A-201ENST00000320578 ZNF222Q9UK12 451 aa15.16■□□□□ 0.02
RAB39A-201ENST00000320578 LAMA5O15230 3695 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 TRBV6-6A0A0A6YYG2 114 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 SLC34A2O95436 690 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 NAPSAO96009 420 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 PTAFRP25105 342 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 CD40P25942 277 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 ARPC4P59998 168 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 RBM39Q14498 530 aaKnown RBP15.15■□□□□ 0.02
RAB39A-201ENST00000320578 MPPED2Q15777 294 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 DHRS11Q6UWP2 260 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 MUC20Q8N307 709 aaPredicted RBP15.15■□□□□ 0.02
RAB39A-201ENST00000320578 POC1AQ8NBT0 407 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 NUP37Q8NFH4 326 aa15.15■□□□□ 0.02
RAB39A-201ENST00000320578 ZNF486Q96H40 463 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 177.8 ms