RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 FAM90A13PP0C7W8 464 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM90A14PP0C7W9 464 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM90A24PP0C7X0 464 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 CA6P23280 308 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 LGALS7P47929 136 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 TNK1Q13470 666 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 LINC00596Q86U02 117 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 GHITMQ9H3K2 345 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM206AQ9NX38 181 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 ZNF629Q9UEG4 869 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 HMX3A6NHT5 357 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 ADRA2AP08913 450 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 HIST3H3Q16695 136 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 C20orf204Q6ZNR8 217 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 SLC25A26Q70HW3 274 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 GGNQ86UU5 652 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 OR5A2Q8NGI9 324 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 OR10R2Q8NGX6 335 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 TMEM56Q96MV1 263 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 RSPO3Q9BXY4 272 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 RANBP3Q9H6Z4 567 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 FKBP11Q9NYL4 201 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 CA11O75493 328 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 C4orf17Q53FE4 359 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 LYPD4Q6UWN0 246 aa7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 SMAP2Q8WU79 429 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-201ENST00000317968 SDCBPO00560 298 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 SC5DO75845 299 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 COX7A1P24310 79 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 GZMKP49863 264 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 NANOS3P60323 173 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 GUCA2AQ02747 115 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 ARRDC1Q8N5I2 433 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 CD300LFQ8TDQ1 290 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 DAZAP1Q96EP5 407 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 TNFRSF19Q9NS68 423 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 F6UZH7 168 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 YIF1AO95070 293 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 HRASP01112 189 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 ANXA7P20073 488 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 FHL1Q13642 323 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 KISS1Q15726 138 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 ETFRF1Q6IPR1 90 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 STEAP1BQ6NZ63 245 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 C12orf45Q8N5I9 185 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 NUP37Q8NFH4 326 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 AUNIPQ9H7T9 357 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 KLHDC2Q9Y2U9 406 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 CEACAM4O75871 244 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 PTGFRP43088 359 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 RFX2P48378 723 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 RAP2BP61225 183 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 PXT1Q8NFP0 134 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 ZNF596Q8TC21 504 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM168AQ92567 244 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 TMEM230Q96A57 120 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 ASF1BQ9NVP2 202 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 DKK4Q9UBT3 224 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 A8MXE2 369 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 ADRB1P08588 477 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 CLDN12P56749 244 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 OR10A3P58181 314 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 UBE2MP61081 183 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 PSG4Q00888 419 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 C17orf107Q6ZR85 190 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 SAXO1Q8IYX7 474 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 ERGIC1Q969X5 290 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 LSM5Q9Y4Y9 91 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 FAHP16930 419 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 ENDOGQ14249 297 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM76BQ5HYJ3 339 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 TMEM229BQ8NBD8 167 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 ARL11Q969Q4 196 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 UHRF2Q96PU4 802 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 PBDC1Q9BVG4 233 aa7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 SIRT4Q9Y6E7 314 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-201ENST00000317968 AKR7A2O43488 359 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 MGMTP16455 207 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 IL13RA1P78552 427 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 FAM27D1Q5T7N8 215 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 MOGAT3Q86VF5 341 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 CMTM2Q8TAZ6 248 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 G6PC2Q9NQR9 355 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 GAR1Q9NY12 217 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 FBLN5Q9UBX5 448 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 HSD17B6O14756 317 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 GMDSO60547 372 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 TIMP3P35625 211 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 ACSF3Q4G176 576 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 SLC25A42Q86VD7 318 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 DYNLRB2Q8TF09 96 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 MAP6Q96JE9 813 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 OR2S2Q9NQN1 319 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 DLL3Q9NYJ7 618 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 A0A0G2JMM0 328 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 A0A1W2PPB8 328 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 A0A1W2PRS3 328 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 KIR3DP1A8MWS1 328 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 CCL1P22362 96 aa7.44□□□□□ -1.22
PDLIM5-201ENST00000317968 PPT1P50897 306 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms