RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ANKRD55Q3KP44 614 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF260Q3ZCT1 412 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 KRBOX4Q5JUW0 171 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 C10orf128Q5T292 105 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 SLC25A42Q86VD7 318 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 SPAG16Q8N0X2 631 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 OR4K15Q8NH41 348 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 SECTM1Q8WVN6 248 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 REEP6Q96HR9 211 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 CNTNAP3BQ96NU0 1288 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 MRI1Q9BV20 369 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 SLCO5A1Q9H2Y9 848 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 RHOFQ9HBH0 211 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 UQCC1Q9NVA1 299 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 COA4Q9NYJ1 87 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 MCTS1Q9ULC4 181 aaKnown RBP6.6□□□□□ -1.35
TRIM55-202ENST00000315962 MRPS28Q9Y2Q9 187 aaKnown RBP6.6□□□□□ -1.35
TRIM55-202ENST00000315962 KLF13Q9Y2Y9 288 aaPredicted RBP6.6□□□□□ -1.35
TRIM55-202ENST00000315962 RFNGQ9Y644 331 aa6.6□□□□□ -1.35
TRIM55-202ENST00000315962 LRBAP50851 2863 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 A0A0A6YYD4 124 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 FAM221AA4D161 298 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 LYZL6O75951 148 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 HPNP05981 417 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 SNRNP70P08621 437 aaKnown RBP6.59□□□□□ -1.35
TRIM55-202ENST00000315962 TMEM225BP0DP42 221 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 TPT1P13693 172 aaKnown RBP6.59□□□□□ -1.35
TRIM55-202ENST00000315962 GABRR1P24046 479 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 MEOX2P50222 304 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 CEBPGP53567 150 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 MTCP1P56278 107 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 OR2B8PP59922 312 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 LSM6P62312 80 aaKnown RBP6.59□□□□□ -1.35
TRIM55-202ENST00000315962 HOXA4Q00056 320 aaPredicted RBP6.59□□□□□ -1.35
TRIM55-202ENST00000315962 RIPPLY1Q0D2K3 151 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 MST1LQ2TV78 715 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 OR14K1Q8NGZ2 314 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 OR1F12Q8NHA8 337 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 SFT2D1Q8WV19 159 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 MITD1Q8WV92 249 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 PIGCQ92535 297 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 DYRK2Q92630 601 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 ARL11Q969Q4 196 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 APH1AQ96BI3 265 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 TRIB1Q96RU8 372 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 SF3B5Q9BWJ5 86 aaKnown RBP6.59□□□□□ -1.35
TRIM55-202ENST00000315962 WNT5BQ9H1J7 359 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 CYTL1Q9NRR1 136 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 CRIM1Q9NZV1 1036 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 NDRG3Q9UGV2 375 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 AMDHD2Q9Y303 409 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 KIAA1549Q9HCM3 1950 aa6.59□□□□□ -1.35
TRIM55-202ENST00000315962 hCG_1809904A0A1W2PP81 198 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 A0A1W2PR64 198 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 A0A1W2PRV1 198 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 A6NLC8 198 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 SYNGR3O43761 229 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 ARG1P05089 322 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 OR8U9P0C7N5 309 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 CPT2P23786 658 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 GRB2P62993 217 aaKnown RBP6.59□□□□□ -1.36
TRIM55-202ENST00000315962 FOXC1Q12948 553 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 ARFRP1Q13795 201 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 PLAC9Q5JTB6 97 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 ABLIM2Q6H8Q1 611 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 CLEC18BQ6UXF7 455 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 CCDC36Q8IYA8 594 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 ZFP62Q8NB50 900 aaPredicted RBP6.59□□□□□ -1.36
TRIM55-202ENST00000315962 OR8U1Q8NH10 309 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 SPTSSAQ969W0 71 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 TMEM230Q96A57 120 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 IP6K3Q96PC2 410 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 OR2H1Q9GZK4 316 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 C5orf66Q9H5L9 145 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 RPS10P5Q9NQ39 176 aa6.59□□□□□ -1.36
TRIM55-202ENST00000315962 RCL1Q9Y2P8 373 aaKnown RBP6.59□□□□□ -1.36
TRIM55-202ENST00000315962 HSPB6O14558 160 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 ATXN7O15265 892 aaPredicted RBP6.58□□□□□ -1.36
TRIM55-202ENST00000315962 SELEP16581 610 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 RAB6AP20340 208 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 RAB1AP62820 205 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 STOML3Q8TAV4 291 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 HAS2Q92819 552 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 BSCL2Q96G97 398 aaPredicted RBP6.58□□□□□ -1.36
TRIM55-202ENST00000315962 ARHGAP5-AS1Q96IT6 56 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 PRRT1Q99946 306 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 NRIP2Q9BQI9 281 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 HDHD3Q9BSH5 251 aaPredicted RBP6.58□□□□□ -1.36
TRIM55-202ENST00000315962 ALX4Q9H161 411 aaPredicted RBP6.58□□□□□ -1.36
TRIM55-202ENST00000315962 ZNF701Q9NV72 531 aaPredicted RBP6.58□□□□□ -1.36
TRIM55-202ENST00000315962 PLA2G2EQ9NZK7 142 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 LSM5Q9Y4Y9 91 aaKnown RBP6.58□□□□□ -1.36
TRIM55-202ENST00000315962 TIMM10BQ9Y5J6 103 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 ARHGAP21Q5T5U3 1957 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 METTL21EPA6NDL7 271 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 SLC22A20A6NK97 555 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 HSPB2A8KAH6 182 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 XRCC2O43543 280 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 LILRA1O75019 489 aa6.58□□□□□ -1.36
TRIM55-202ENST00000315962 CD74P04233 296 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms