RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 BHLHA15Q7RTS1 189 aaPredicted RBP19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 OR10AD1Q8NGE0 317 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 OR5P3Q8WZ94 311 aa19.23■□□□□ 0.67
PDLIM2-202ENST00000308354 ZZEF1O43149 2961 aa19.22■□□□□ 0.67
PDLIM2-202ENST00000308354 MSTNO14793 375 aa19.22■□□□□ 0.67
PDLIM2-202ENST00000308354 CA11O75493 328 aa19.22■□□□□ 0.67
PDLIM2-202ENST00000308354 PI3P19957 117 aa19.22■□□□□ 0.67
PDLIM2-202ENST00000308354 C4BPBP20851 252 aa19.22■□□□□ 0.67
PDLIM2-202ENST00000308354 CHRFAM7AQ494W8 412 aa19.22■□□□□ 0.67
PDLIM2-202ENST00000308354 BEND4Q6ZU67 534 aa19.22■□□□□ 0.67
PDLIM2-202ENST00000308354 OR5AP2Q8NGF4 316 aa19.22■□□□□ 0.67
PDLIM2-202ENST00000308354 CITED4Q96RK1 184 aa19.22■□□□□ 0.67
PDLIM2-202ENST00000308354 IL36GQ9NZH8 169 aa19.22■□□□□ 0.67
PDLIM2-202ENST00000308354 GPR132Q9UNW8 380 aa19.22■□□□□ 0.67
PDLIM2-202ENST00000308354 CEACAM18A8MTB9 384 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 DLL1O00548 723 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 SYNGR1O43759 233 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 HOXB1P14653 301 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 TDGF1P3P51864 188 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 GMFBP60983 142 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 P2RY6Q15077 328 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 AADACL3Q5VUY0 350 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 LPCAT3Q6P1A2 487 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 LHFPL1Q86WI0 220 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 OR5A2Q8NGI9 324 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 PCNPQ8WW12 178 aaKnown RBP19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 SEC22AQ96IW7 307 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 SULT4A1Q9BR01 284 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 PDCD10Q9BUL8 212 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 SH3BGRL2Q9UJC5 107 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 TLN1Q9Y490 2541 aaKnown RBP19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 CECR9P0C854 216 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 S100A11P31949 105 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 TAS2R31P59538 309 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 PPA1Q15181 289 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 HAGHLQ6PII5 290 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 FBXW12Q6X9E4 464 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 KCTD9Q7L273 389 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 TMEM230Q96A57 120 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 PPA2Q9H2U2 334 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 MTCH1Q9NZJ7 389 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 IL36RNQ9UBH0 155 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 UBQLN2Q9UHD9 624 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 AK3Q9UIJ7 227 aa19.21■□□□□ 0.67
PDLIM2-202ENST00000308354 RFPL4AA6NLU0 287 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 RFPL4AL1F8VTS6 287 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 DUS4LO95620 317 aaKnown RBP19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 CD8AP01732 235 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 PTGER4P35408 488 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 DAZAP2Q15038 168 aaPredicted RBP19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 TMUB2Q71RG4 321 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 OVCH2Q7RTZ1 564 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 TMEM17Q86X19 198 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 ZNF488Q96MN9 340 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 OSGIN2Q9Y236 505 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 ZGRF1Q86YA3 2104 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 IGHV3-64DA0A0J9YX35 117 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 FAM221AA4D161 298 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 OR5H14A6NHG9 310 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 OR5H1A6NKK0 313 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 FAM25EA8MYX2 175 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 CHATP28329 748 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 TIMP3P35625 211 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 RBM11P57052 281 aaKnown RBP19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 TMPRSS3P57727 454 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 TMEM128Q5BJH2 165 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 ZSCAN4Q8NAM6 433 aaPredicted RBP19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 BOD1Q96IK1 185 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 ARL6Q9H0F7 186 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 TINAGQ9UJW2 476 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 HSF4Q9ULV5 492 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 MPC1Q9Y5U8 109 aa19.2■□□□□ 0.66
PDLIM2-202ENST00000308354 OR7C1O76099 320 aaPredicted RBP19.19■□□□□ 0.66
PDLIM2-202ENST00000308354 CRHP06850 196 aa19.19■□□□□ 0.66
PDLIM2-202ENST00000308354 GLI4P10075 376 aa19.19■□□□□ 0.66
PDLIM2-202ENST00000308354 FPR2P25090 351 aa19.19■□□□□ 0.66
PDLIM2-202ENST00000308354 MPV17P39210 176 aa19.19■□□□□ 0.66
PDLIM2-202ENST00000308354 LRRC37A5PQ49AS3 106 aa19.19■□□□□ 0.66
PDLIM2-202ENST00000308354 PEG10Q86TG7 708 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-202ENST00000308354 DOLPP1Q86YN1 238 aa19.19■□□□□ 0.66
PDLIM2-202ENST00000308354 SNRNP40Q96DI7 357 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-202ENST00000308354 MAB21L2Q9Y586 359 aa19.19■□□□□ 0.66
PDLIM2-202ENST00000308354 SNAPC5O75971 98 aa19.19■□□□□ 0.66
PDLIM2-202ENST00000308354 SRSF4Q08170 494 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-202ENST00000308354 PSG7Q13046 419 aa19.19■□□□□ 0.66
PDLIM2-202ENST00000308354 MRPS24Q96EL2 167 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-202ENST00000308354 RTBDNQ9BSG5 229 aaPredicted RBP19.19■□□□□ 0.66
PDLIM2-202ENST00000308354 FZR1Q9UM11 496 aa19.19■□□□□ 0.66
PDLIM2-202ENST00000308354 HLA-GP17693 338 aa19.18■□□□□ 0.66
PDLIM2-202ENST00000308354 BMP5P22003 454 aa19.18■□□□□ 0.66
PDLIM2-202ENST00000308354 OPRM1P35372 400 aa19.18■□□□□ 0.66
PDLIM2-202ENST00000308354 TMEM185AQ8NFB2 350 aa19.18■□□□□ 0.66
PDLIM2-202ENST00000308354 KLF14Q8TD94 323 aaPredicted RBP19.18■□□□□ 0.66
PDLIM2-202ENST00000308354 S100PBPQ96BU1 408 aa19.18■□□□□ 0.66
PDLIM2-202ENST00000308354 ASF1BQ9NVP2 202 aa19.18■□□□□ 0.66
PDLIM2-202ENST00000308354 ESPL1Q14674 2120 aa19.17■□□□□ 0.66
PDLIM2-202ENST00000308354 IGHV1-18A0A0C4DH31 117 aa19.17■□□□□ 0.66
PDLIM2-202ENST00000308354 RPS10-NUDT3A0A1W2PQS6 291 aa19.17■□□□□ 0.66
PDLIM2-202ENST00000308354 J3QW42 95 aa19.17■□□□□ 0.66
PDLIM2-202ENST00000308354 DUSP1P28562 367 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms