RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 OR11G2Q8NGC1 345 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 ZCCHC14Q8WYQ9 949 aaKnown RBP11.24□□□□□ -0.61
USP38-201ENST00000307017 MCHR2Q969V1 340 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 RAB33BQ9H082 229 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 HRKO00198 91 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 TMPRSS2O15393 492 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 ZIC3O60481 467 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 CT62P0C5K7 136 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 GLB1P16278 677 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 CCKARP32238 428 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 KCNJ3P48549 501 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 HINT1P49773 126 aaPredicted RBP11.24□□□□□ -0.61
USP38-201ENST00000307017 FZD5Q13467 585 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 DHRS4L2Q6PKH6 230 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 KISS1RQ969F8 398 aaPredicted RBP11.24□□□□□ -0.61
USP38-201ENST00000307017 ABHD1Q96SE0 405 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 TMEM147Q9BVK8 224 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 PDFQ9HBH1 243 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 COTL1Q14019 142 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 THSD4Q6ZMP0 1018 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 ZNF764Q96H86 408 aaPredicted RBP11.24□□□□□ -0.61
USP38-201ENST00000307017 MOGAT1Q96PD6 335 aa11.24□□□□□ -0.61
USP38-201ENST00000307017 TMEM33P57088 247 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 MGAT2Q10469 447 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 PSG5Q15238 335 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 PRNTQ86SH4 94 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 RND1Q92730 232 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 PELI1Q96FA3 418 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 PRRX2Q99811 253 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 PLEKHA2Q9HB19 425 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 SLC45A2Q9UMX9 530 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 TGFAP01135 160 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 FAM87AP0C7U9 286 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 OR3A1P47881 315 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 RTP5Q14D33 572 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 LDLRAD1Q5T700 205 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 DUSP21Q9H596 190 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 DUSP22Q9NRW4 184 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 NTMQ9P121 344 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 MIOXQ9UGB7 285 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 ZFPL1O95159 310 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 VSIG10L2P0DP72 767 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 PPIL1Q9Y3C6 166 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 A0A0A6YYD5 115 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 J3QR89 54 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 C1QL3Q5VWW1 255 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 C5orf17Q8NAS9 161 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 RICTORQ6R327 1708 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 C2CD4DB7Z1M9 353 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 KRTCAP3Q53RY4 240 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 C9orf50Q5SZB4 431 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 D2HGDHQ8N465 521 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 FOXB1Q99853 325 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 ADAMTS5Q9UNA0 930 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 KLK10O43240 276 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 EIF4E2O60573 245 aaKnown RBP11.23□□□□□ -0.61
USP38-201ENST00000307017 SP1P08047 785 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 FAHD1Q6P587 224 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 NUP37Q8NFH4 326 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 OR1F12Q8NHA8 337 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 TMEM9BQ9NQ34 198 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 UQCC1Q9NVA1 299 aa11.23□□□□□ -0.61
USP38-201ENST00000307017 MPC2O95563 127 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 S100A8P05109 93 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 CD27P26842 260 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 FUT7Q11130 342 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 OR1C1Q15619 314 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 WDR25Q64LD2 544 aaPredicted RBP11.22□□□□□ -0.61
USP38-201ENST00000307017 ZNF488Q96MN9 340 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 CA10Q9NS85 328 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 TAAR3PQ9P1P4 343 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 IGLV3-10A0A075B6K4 115 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 IGHV5-51A0A0C4DH38 117 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.22□□□□□ -0.61
USP38-201ENST00000307017 CDC42EP2O14613 210 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 ZNF716A6NP11 495 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 K7ESF4 209 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 GFRA1P56159 465 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 RSPO4Q2I0M5 234 aaPredicted RBP11.22□□□□□ -0.61
USP38-201ENST00000307017 CLN8Q9UBY8 286 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 TPRX1Q8N7U7 411 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 OTOSQ8NHW6 89 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 FAHD2AQ96GK7 314 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 CRISPLD2Q9H0B8 497 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 WDR13Q9H1Z4 485 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 FBP1P09467 338 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 OR4A47Q6IF82 309 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 SMIM4Q8WVI0 70 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 SCPEP1Q9HB40 452 aa11.22□□□□□ -0.61
USP38-201ENST00000307017 CHST1O43916 411 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 TSPAN12O95859 305 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 ZNF32P17041 273 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 PTGFRP43088 359 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 CDC20Q12834 499 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 DHRS13Q6UX07 377 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 OR52L2PQ8NGH6 319 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 CDCA3Q99618 268 aaPredicted RBP11.21□□□□□ -0.61
USP38-201ENST00000307017 LRRC61Q9BV99 259 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 PECRQ9BY49 303 aa11.21□□□□□ -0.61
USP38-201ENST00000307017 UBTD1Q9HAC8 227 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms