RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 LPCAT3Q6P1A2 487 aa9.05□□□□□ -0.96
CLP1-201ENST00000302731 GFRALQ6UXV0 394 aa9.05□□□□□ -0.96
CLP1-201ENST00000302731 NLRC3Q7RTR2 1065 aa9.05□□□□□ -0.96
CLP1-201ENST00000302731 SSX8Q7RTT4 187 aa9.05□□□□□ -0.96
CLP1-201ENST00000302731 TMED4Q7Z7H5 227 aa9.05□□□□□ -0.96
CLP1-201ENST00000302731 LYG2Q86SG7 212 aa9.05□□□□□ -0.96
CLP1-201ENST00000302731 C12orf45Q8N5I9 185 aaPredicted RBP9.05□□□□□ -0.96
CLP1-201ENST00000302731 MUCL1Q96DR8 90 aa9.05□□□□□ -0.96
CLP1-201ENST00000302731 CCDC120Q96HB5 630 aa9.05□□□□□ -0.96
CLP1-201ENST00000302731 DHRS9Q9BPW9 319 aa9.05□□□□□ -0.96
CLP1-201ENST00000302731 C1QTNF6Q9BXI9 259 aa9.05□□□□□ -0.96
CLP1-201ENST00000302731 DECR2Q9NUI1 292 aa9.05□□□□□ -0.96
CLP1-201ENST00000302731 TMEM100Q9NV29 134 aa9.05□□□□□ -0.96
CLP1-201ENST00000302731 EHFQ9NZC4 300 aa9.05□□□□□ -0.96
CLP1-201ENST00000302731 PIPOXQ9P0Z9 390 aa9.05□□□□□ -0.96
CLP1-201ENST00000302731 PURGQ9UJV8 347 aaKnown RBP9.05□□□□□ -0.96
CLP1-201ENST00000302731 ACACAQ13085 2346 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 SYNGR1O43759 233 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 HLA-AP01891 365 aaKnown RBP9.04□□□□□ -0.96
CLP1-201ENST00000302731 HLA-GP17693 338 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 DNASE1P24855 282 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 MPV17P39210 176 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 ARPC4P59998 168 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 IFITM2Q01629 132 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 TMEM128Q5BJH2 165 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 AADACL3Q5VUY0 350 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 C3P1Q6ZMU1 363 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 FAM58AQ8N1B3 248 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 OR2T35Q8NGX2 323 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 OR13G1Q8NGZ3 307 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 MITD1Q8WV92 249 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 S100PBPQ96BU1 408 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 SNRNP40Q96DI7 357 aaKnown RBP9.04□□□□□ -0.96
CLP1-201ENST00000302731 CYYR1Q96J86 154 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 RADILQ96JH8 1075 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 HDHD3Q9BSH5 251 aaPredicted RBP9.04□□□□□ -0.96
CLP1-201ENST00000302731 ADAT1Q9BUB4 502 aaKnown RBP9.04□□□□□ -0.96
CLP1-201ENST00000302731 GON7Q9BXV9 100 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 RIMS4Q9H426 269 aaPredicted RBP9.04□□□□□ -0.96
CLP1-201ENST00000302731 ZNF442Q9H7R0 627 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 FN3KRPQ9HA64 309 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 ZNF286AQ9HBT8 521 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 CA10Q9NS85 328 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 NECAP2Q9NVZ3 263 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 ELOVL5Q9NYP7 299 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 ZNF581Q9P0T4 197 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 RAXQ9Y2V3 346 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 LOC400499M0QZD8 3231 aa9.04□□□□□ -0.96
CLP1-201ENST00000302731 IGKV1D-8A0A087WSZ0 117 aa9.03□□□□□ -0.96
CLP1-201ENST00000302731 C9orf170A2RU37 121 aa9.03□□□□□ -0.96
CLP1-201ENST00000302731 F8VVB4 439 aa9.03□□□□□ -0.96
CLP1-201ENST00000302731 F8VWA3 439 aa9.03□□□□□ -0.96
CLP1-201ENST00000302731 SMLR1H3BR10 107 aa9.03□□□□□ -0.96
CLP1-201ENST00000302731 DUS4LO95620 317 aaKnown RBP9.03□□□□□ -0.96
CLP1-201ENST00000302731 GCH1P30793 250 aa9.03□□□□□ -0.96
CLP1-201ENST00000302731 CALCRP30988 508 aa9.03□□□□□ -0.96
CLP1-201ENST00000302731 ERVK11-1P61568 191 aa9.03□□□□□ -0.96
CLP1-201ENST00000302731 MZT1Q08AG7 82 aa9.03□□□□□ -0.96
CLP1-201ENST00000302731 OR8G1Q15617 311 aa9.03□□□□□ -0.96
CLP1-201ENST00000302731 ZNF660Q6AZW8 331 aaPredicted RBP9.03□□□□□ -0.96
CLP1-201ENST00000302731 DHRS11Q6UWP2 260 aa9.03□□□□□ -0.96
CLP1-201ENST00000302731 MARCH1Q8TCQ1 289 aa9.03□□□□□ -0.96
CLP1-201ENST00000302731 C5orf66Q9H5L9 145 aa9.03□□□□□ -0.96
CLP1-201ENST00000302731 SLA2Q9H6Q3 261 aa9.03□□□□□ -0.96
CLP1-201ENST00000302731 SPEF1Q9Y4P9 236 aa9.03□□□□□ -0.96
CLP1-201ENST00000302731 ZFHX4Q86UP3 3567 aa9.03□□□□□ -0.96
CLP1-201ENST00000302731 TRBV6-6A0A0A6YYG2 114 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 A0A0B4J2A0 478 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 A0A0G2JNJ9 132 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 MCRIP1C9JLW8 97 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 F5H5P2 479 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 NOS1APO75052 506 aaPredicted RBP9.02□□□□□ -0.96
CLP1-201ENST00000302731 SLC22A5O76082 557 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 NAPSAO96009 420 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 FAM87AP0C7U9 286 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 PGA5P0DJD9 388 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 OR5H8P0DN80 308 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 PRKACAP17612 351 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 CD34P28906 385 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 IL13RA1P78552 427 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 SRSF4Q08170 494 aaKnown RBP9.02□□□□□ -0.96
CLP1-201ENST00000302731 ZNF154Q13106 437 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 PPP1R1AQ13522 171 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 RBM39Q14498 530 aaKnown RBP9.02□□□□□ -0.96
CLP1-201ENST00000302731 ALKBH6Q3KRA9 238 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 LAMTOR1Q6IAA8 161 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 C17orf107Q6ZR85 190 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 WDR86Q86TI4 376 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 C9orf62Q8N4C0 152 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 SCCPDHQ8NBX0 429 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 MAFIPQ8WZ33 124 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 PHB2Q99623 299 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 TMEM246Q9BRR3 403 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 TMPRSS13Q9BYE2 586 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 TLNRD1Q9H1K6 362 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 CXXC4Q9H2H0 198 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 ASF1BQ9NVP2 202 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 TREM2Q9NZC2 230 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 JKAMPQ9P055 326 aa9.02□□□□□ -0.96
CLP1-201ENST00000302731 Q9UFV3 132 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms