RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 WFDC3Q8IUB2 231 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 C1orf210Q8IVY1 113 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OR10G4Q8NGN3 311 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OR10G9Q8NGN4 311 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 OR10G7Q8NGN6 311 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 RGP1Q92546 391 aaPredicted RBP12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 WASHC3Q9Y3C0 194 aa12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 YTHDF2Q9Y5A9 579 aaKnown RBP12.02□□□□□ -0.48
CHRFAM7A-201ENST00000299847 PLPP2O43688 288 aa12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ZNF154Q13106 437 aa12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 TRIP6Q15654 476 aaKnown RBP12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ST8SIA5O15466 376 aa12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ETV3LQ6ZN32 361 aa12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 BHLHA15Q7RTS1 189 aaPredicted RBP12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ZNF275Q9NSD4 429 aaPredicted RBP12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ZMAT5Q9UDW3 170 aaKnown RBP12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 FGF2P09038 288 aa12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 SNRPCP09234 159 aaKnown RBP12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 FBP1P09467 338 aa12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 RPL7P18124 248 aaKnown RBP12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ZP3P21754 424 aa12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 SSPNQ14714 243 aa12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 KIAA0040Q15053 153 aa12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 TMEM97Q5BJF2 176 aa12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ZNF547Q8IVP9 402 aa12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 PRSS3P2Q8NHM4 247 aa12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 CHRDL1Q9BU40 450 aa12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.02□□□□□ -0.49
CHRFAM7A-201ENST00000299847 GEMIN2O14893 280 aaKnown RBP12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 SOCS1O15524 211 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 OR4D11Q8NGI4 311 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 OR13G1Q8NGZ3 307 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 NUP205Q92621 2012 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 HRASP01112 189 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 CCL4P13236 92 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 CD226Q15762 336 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 POM121Q96HA1 1249 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 MOGAT3Q86VF5 341 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 EAF1Q96JC9 268 aaPredicted RBP12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 TMEM204Q9BSN7 226 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 FBXL17Q9UF56 701 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 WSB1Q9Y6I7 421 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ALS2Q96Q42 1657 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 AKAP11Q9UKA4 1901 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 A0A1W2PPE3 182 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 CST4P01036 141 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 CD40P25942 277 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 TMEM241Q24JQ0 296 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ZDHHC22Q8N966 263 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 OR1K1Q8NGR3 316 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 DAOP14920 347 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 HIKESHIQ53FT3 197 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ARRDC1Q8N5I2 433 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 SSMEM1Q8WWF3 244 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 WDR13Q9H1Z4 485 aa12.01□□□□□ -0.49
CHRFAM7A-201ENST00000299847 K7EQS6 105 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 SSBP1Q04837 148 aaKnown RBP12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 MESTQ5EB52 335 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 Q8IYB0 196 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 CXXC4Q9H2H0 198 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 MRM2Q9UI43 246 aaKnown RBP12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ZNF716A6NP11 495 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 CDRT15L2A8MXV6 281 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 PNPP00491 289 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ARG1P05089 322 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 FOXO1Q12778 655 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 IL11RAQ14626 422 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 SLC2A9Q9NRM0 540 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 A0A1B0GTQ1 180 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 SRD5A3Q9H8P0 318 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ZFP64Q9NPA5 681 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 DOCK2Q92608 1830 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 MS4A18H0YCH9 400 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 MPC2O95563 127 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 MS4A18Q3C1V0 323 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 VN1R4Q7Z5H5 301 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 GPBAR1Q8TDU6 330 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 GPR27Q9NS67 375 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 TMEM140Q9NV12 185 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 AURKAIP1Q9NWT8 199 aaPredicted RBP12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 DNPH1O43598 174 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 EML2O95834 649 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 HPXP02790 462 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ANKRD34CP0C6C1 535 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 DRD3P35462 400 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 PIGYQ3MUY2 71 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 TRAT1Q6PIZ9 186 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ISOC2Q96AB3 205 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 NTNG2Q96CW9 530 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 GABRG3Q99928 467 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 LIPGQ9Y5X9 500 aa12□□□□□ -0.49
CHRFAM7A-201ENST00000299847 TIPARPQ7Z3E1 657 aaKnown RBP11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 ADAD2Q8NCV1 583 aaKnown RBP11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 IGFBP7Q16270 282 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 NCMAPQ5T1S8 102 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 TMEM108Q6UXF1 575 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 VSTM2LQ96N03 204 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 FRRS1LQ9P0K9 344 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 MTFP1Q9UDX5 166 aa11.99□□□□□ -0.49
CHRFAM7A-201ENST00000299847 TMED3Q9Y3Q3 217 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms