RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 RHOVQ96L33 236 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 OR2D2Q9H210 308 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 GON4LQ3T8J9 2241 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 BPIFB3P59826 476 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 IL13RA2Q14627 380 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 MICBQ29980 383 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 Q6ZN92 141 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 NOL4LQ96MY1 436 aaPredicted RBP13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 LOXL2Q9Y4K0 774 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 FAM74A7A6NL05 159 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 FAM74A3Q4VXF1 159 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 A0A1W2PPV9 198 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 NANOS3P60323 173 aaKnown RBP13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 FAM3AP98173 230 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 PSG6Q00889 435 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 Q3ZCU0 254 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 STPG2Q8N412 459 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 RPS4Y2Q8TD47 263 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 PSG11Q9UQ72 335 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 SLC22A20A6NK97 555 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 WFDC8Q8IUA0 241 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 DOK5Q9P104 306 aa13.58□□□□□ -0.24
SHROOM4-201ENST00000289292 TRBV23-1A0A0A0MS06 115 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 CRYM-AS1A6NIL9 109 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 BMPR1BO00238 502 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 GP1BAP07359 652 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 PNLIPP16233 465 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 CHRNB4P30926 498 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 GALNSP34059 522 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 WDR13Q9H1Z4 485 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 MARF1Q9Y4F3 1742 aaKnown RBP13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 MDKP21741 143 aaPredicted RBP13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 CNN1P51911 297 aaKnown RBP13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 OR10G4Q8NGN3 311 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 OR10G9Q8NGN4 311 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 OR10G7Q8NGN6 311 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 SLC52A3Q9NQ40 469 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 TIMM9Q9Y5J7 89 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 ZNF880Q6PDB4 577 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 TTC9Q92623 222 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 HDHD3Q9BSH5 251 aaPredicted RBP13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 NGBQ9NPG2 151 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 PABPC1L2AQ5JQF8 200 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 ZNF784Q8NCA9 323 aaPredicted RBP13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 BLNKQ8WV28 456 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 APOBEC3DQ96AK3 386 aaPredicted RBP13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 ZNF391Q9UJN7 358 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 PROCRQ9UNN8 238 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 ELOA3CA0A087WX78 387 aaPredicted RBP13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 TMEM30CPA0ZSE6 113 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 S100A7P31151 101 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 SCAND1P57086 179 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 GUSBP11Q6P575 273 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 OR2Z1Q8NG97 314 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 PPP1R3EQ9H7J1 279 aa13.57□□□□□ -0.24
SHROOM4-201ENST00000289292 NGFP01138 241 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 CEBPEQ15744 281 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 C9orf50Q5SZB4 431 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 ZNF770Q6IQ21 691 aaPredicted RBP13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 ATG4DQ86TL0 474 aaPredicted RBP13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 ZADH2Q8N4Q0 377 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 BOD1Q96IK1 185 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 DTX4Q9Y2E6 619 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 BCL3P20749 454 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 J3QR89 54 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 TMEM92Q6UXU6 159 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 SPNS3Q6ZMD2 512 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 ASB5Q8WWX0 329 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 HPP00738 406 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 PGA3P0DJD8 388 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 RBPJQ06330 500 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 MRPS18BQ9Y676 258 aaKnown RBP13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 CFDP00746 253 aaPredicted RBP13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 MGAT2Q10469 447 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 DGAT2L6Q6ZPD8 337 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 LYZL2Q7Z4W2 148 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 TMEM52Q8NDY8 209 aa13.56□□□□□ -0.24
SHROOM4-201ENST00000289292 RPEL1Q2QD12 228 aa13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 SLC25A30Q5SVS4 291 aa13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 AURKAIP1Q9NWT8 199 aaPredicted RBP13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 CHST1O43916 411 aa13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 HEXAP06865 529 aa13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 PEBP1P30086 187 aaKnown RBP13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 RPLP1P05386 114 aaKnown RBP13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 PIGYQ3MUY2 71 aa13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 DHRS7BQ6IAN0 325 aaPredicted RBP13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 FSCN3Q9NQT6 498 aa13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 TAAR3PQ9P1P4 343 aa13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 FUT9Q9Y231 359 aa13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 LILRA5A6NI73 299 aa13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 OR4C45A6NMZ5 311 aa13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 GNG4P50150 75 aa13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 PKIAP61925 76 aa13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 RAB40CQ96S21 281 aa13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 KLF13Q9Y2Y9 288 aaPredicted RBP13.55□□□□□ -0.24
SHROOM4-201ENST00000289292 CDK2AP1O14519 115 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 POU2F2P09086 479 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 CDC34P49427 236 aaPredicted RBP13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 TCL1AP56279 114 aa13.54□□□□□ -0.24
SHROOM4-201ENST00000289292 OR1K1Q8NGR3 316 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms