RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 SRSF6Q13247 344 aaKnown RBP13.65□□□□□ -0.23
LRFN1-201ENST00000248668 FAM189A2Q15884 450 aa13.65□□□□□ -0.23
LRFN1-201ENST00000248668 ZNF124Q15973 351 aa13.65□□□□□ -0.23
LRFN1-201ENST00000248668 GUCA2BQ16661 112 aa13.65□□□□□ -0.23
LRFN1-201ENST00000248668 RPUSD3Q6P087 351 aaKnown RBP13.65□□□□□ -0.23
LRFN1-201ENST00000248668 LPCAT3Q6P1A2 487 aa13.65□□□□□ -0.23
LRFN1-201ENST00000248668 C5orf24Q7Z6I8 188 aa13.65□□□□□ -0.23
LRFN1-201ENST00000248668 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.65□□□□□ -0.23
LRFN1-201ENST00000248668 OR6K3Q8NGY3 331 aa13.65□□□□□ -0.23
LRFN1-201ENST00000248668 OR51F2Q8NH61 342 aa13.65□□□□□ -0.23
LRFN1-201ENST00000248668 SPSB1Q96BD6 273 aa13.65□□□□□ -0.23
LRFN1-201ENST00000248668 PAPOLGQ9BWT3 736 aaKnown RBP13.65□□□□□ -0.23
LRFN1-201ENST00000248668 TM2D1Q9BX74 207 aa13.65□□□□□ -0.23
LRFN1-201ENST00000248668 GPR87Q9BY21 358 aa13.65□□□□□ -0.23
LRFN1-201ENST00000248668 ANAPC10Q9UM13 185 aa13.65□□□□□ -0.23
LRFN1-201ENST00000248668 POLEQ07864 2286 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 F5H0A9 414 aaPredicted RBP13.64□□□□□ -0.23
LRFN1-201ENST00000248668 TAS2R46P59540 309 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 CLINT1Q14677 625 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 IGFBP7Q16270 282 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 ACTBL2Q562R1 376 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 RIPPLY2Q5TAB7 128 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 JMJD6Q6NYC1 403 aaPredicted RBP13.64□□□□□ -0.23
LRFN1-201ENST00000248668 OR56B2PQ8NGI1 322 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 SFT2D1Q8WV19 159 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 PFDN5Q99471 154 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 ST3GAL6Q9Y274 331 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 FPR2P25090 351 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 NPBWR2P48146 333 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 TAS2R31P59538 309 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 PPIAP62937 165 aaKnown RBP13.64□□□□□ -0.23
LRFN1-201ENST00000248668 SLC25A26Q70HW3 274 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 OR5T2Q8NGG2 359 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 MED9Q9NWA0 146 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 OSGIN2Q9Y236 505 aa13.64□□□□□ -0.23
LRFN1-201ENST00000248668 HSPB6O14558 160 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 SFT2D2O95562 160 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 NUFIP2Q7Z417 695 aaKnown RBP13.63□□□□□ -0.23
LRFN1-201ENST00000248668 PUSL1Q8N0Z8 303 aaKnown RBP13.63□□□□□ -0.23
LRFN1-201ENST00000248668 INO80EQ8NBZ0 244 aaPredicted RBP13.63□□□□□ -0.23
LRFN1-201ENST00000248668 ADAMTS17Q8TE56 1095 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 RBM14Q96PK6 669 aaKnown RBP13.63□□□□□ -0.23
LRFN1-201ENST00000248668 LIME1Q9H400 295 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 SLC7A11Q9UPY5 501 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 C21orf140B9A014 251 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 NGFP01138 241 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 CRHP06850 196 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 S100A10P60903 97 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 PMP22Q01453 160 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 ZNF528Q3MIS6 628 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 FAHD2BQ6P2I3 314 aaPredicted RBP13.63□□□□□ -0.23
LRFN1-201ENST00000248668 OR10AD1Q8NGE0 317 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 FAHD2AQ96GK7 314 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 OR10C1Q96KK4 312 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 OR7C1O76099 320 aaPredicted RBP13.63□□□□□ -0.23
LRFN1-201ENST00000248668 PSMB6P28072 239 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 LDLRAD3Q86YD5 345 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 MCEMP1Q8IX19 187 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 OR5M9Q8NGP3 310 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 TMEM9BQ9NQ34 198 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 NDRG3Q9UGV2 375 aa13.63□□□□□ -0.23
LRFN1-201ENST00000248668 H0YIZ8 118 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 LHFPL1Q86WI0 220 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 ZNF100Q8IYN0 542 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 KCNRGQ8N5I3 272 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 TMEM185AQ8NFB2 350 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 PXT1Q8NFP0 134 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 C10orf35Q96D05 121 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 MARS2Q96GW9 593 aaKnown RBP13.62□□□□□ -0.23
LRFN1-201ENST00000248668 A0A0D9SG52 128 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 A0A1B0GV90 55 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 TERTO14746 1132 aaKnown RBP13.62□□□□□ -0.23
LRFN1-201ENST00000248668 ZNF708P17019 499 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 PTGER4P35408 488 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 PDZK1IP1Q13113 114 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 AIMP2Q13155 320 aaKnown RBP13.62□□□□□ -0.23
LRFN1-201ENST00000248668 SP6Q3SY56 376 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 ACOT7LQ6ZUV0 252 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 LHFPL2Q6ZUX7 228 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 ZNF611Q8N823 705 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 RRNAD1Q96FB5 475 aaKnown RBP13.62□□□□□ -0.23
LRFN1-201ENST00000248668 PRSS50Q9UI38 385 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 C14orf166Q9Y224 244 aaKnown RBP13.62□□□□□ -0.23
LRFN1-201ENST00000248668 A0A0B4J2A0 478 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 DBX1A6NMT0 343 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 ST8SIA5O15466 376 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 OR5H8P0DN80 308 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 DUSP1P28562 367 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 TMEM200AQ86VY9 491 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 OSR2Q8N2R0 312 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 APH1AQ96BI3 265 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 HS3ST6Q96QI5 342 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 OR5AC2Q9NZP5 309 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 SHPKQ9UHJ6 478 aa13.62□□□□□ -0.23
LRFN1-201ENST00000248668 TEX13DA0A0J9YY54 714 aaPredicted RBP13.61□□□□□ -0.23
LRFN1-201ENST00000248668 ZNF816-ZNF321PA0A0X1KG74 233 aa13.61□□□□□ -0.23
LRFN1-201ENST00000248668 A0A1W2PR80 420 aa13.61□□□□□ -0.23
LRFN1-201ENST00000248668 SP1P08047 785 aa13.61□□□□□ -0.23
LRFN1-201ENST00000248668 GPM6AP51674 278 aa13.61□□□□□ -0.23
LRFN1-201ENST00000248668 HIKESHIQ53FT3 197 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms