RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 NTN3O00634 580 aaPredicted RBP14.1□□□□□ -0.15
LTBR-201ENST00000228918 OR8U9P0C7N5 309 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 HAAOP46952 286 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 DVL1P1P54792 670 aaPredicted RBP14.1□□□□□ -0.15
LTBR-201ENST00000228918 PSG4Q00888 419 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 TSPO2Q5TGU0 170 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 ABLIM2Q6H8Q1 611 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 BRICD5Q6PL45 260 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 AAED1Q7RTV5 226 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 ZFP82Q8N141 532 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 FBXL14Q8N1E6 418 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 NAXEQ8NCW5 288 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 OR8U1Q8NH10 309 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 C18orf12Q96KH6 178 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 SGCZQ96LD1 299 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 FAM221AA4D161 298 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 H7C1Q1 480 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 S100A8P05109 93 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 FOLR3P41439 243 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 CARD18P57730 90 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 PDZK1IP1Q13113 114 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 TRA2AQ13595 282 aaKnown RBP eCLIP14.1□□□□□ -0.15
LTBR-201ENST00000228918 LIAT1Q6ZQX7 453 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 LYZL2Q7Z4W2 148 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 OR14L1PQ8NHC6 308 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 BSCL2Q96G97 398 aaPredicted RBP14.1□□□□□ -0.15
LTBR-201ENST00000228918 FOXB1Q99853 325 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 OR2H1Q9GZK4 316 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 WNT5BQ9H1J7 359 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 RGCCQ9H4X1 137 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 ZNF286AQ9HBT8 521 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 ST3GAL6Q9Y274 331 aa14.1□□□□□ -0.15
LTBR-201ENST00000228918 SHANK1Q9Y566 2161 aa14.09□□□□□ -0.15
LTBR-201ENST00000228918 CXCL13O43927 109 aa14.09□□□□□ -0.15
LTBR-201ENST00000228918 FOLR2P14207 255 aa14.09□□□□□ -0.15
LTBR-201ENST00000228918 ZNF92Q03936 586 aa14.09□□□□□ -0.15
LTBR-201ENST00000228918 PHLDA2Q53GA4 152 aa14.09□□□□□ -0.15
LTBR-201ENST00000228918 FGFBP3Q8TAT2 258 aa14.09□□□□□ -0.15
LTBR-201ENST00000228918 MOB3AQ96BX8 217 aa14.09□□□□□ -0.15
LTBR-201ENST00000228918 MSI2Q96DH6 328 aaKnown RBP14.09□□□□□ -0.15
LTBR-201ENST00000228918 KIRREL1Q96J84 757 aa14.09□□□□□ -0.15
LTBR-201ENST00000228918 TIMM10BQ9Y5J6 103 aa14.09□□□□□ -0.15
LTBR-201ENST00000228918 FUT6P51993 359 aa14.08□□□□□ -0.15
LTBR-201ENST00000228918 ZFP36L1Q07352 338 aaKnown RBP14.08□□□□□ -0.15
LTBR-201ENST00000228918 OR8B8Q15620 311 aa14.08□□□□□ -0.15
LTBR-201ENST00000228918 CEACAM16Q2WEN9 425 aa14.08□□□□□ -0.15
LTBR-201ENST00000228918 CLEC9AQ6UXN8 241 aa14.08□□□□□ -0.15
LTBR-201ENST00000228918 Q6ZPA2 131 aa14.08□□□□□ -0.15
LTBR-201ENST00000228918 SLC16A13Q7RTY0 426 aa14.08□□□□□ -0.15
LTBR-201ENST00000228918 OR5L1Q8NGL2 311 aa14.08□□□□□ -0.15
LTBR-201ENST00000228918 HLA-CQ95604 372 aa14.08□□□□□ -0.15
LTBR-201ENST00000228918 ADGRG7Q96K78 797 aa14.08□□□□□ -0.15
LTBR-201ENST00000228918 RNF122Q9H9V4 155 aa14.08□□□□□ -0.15
LTBR-201ENST00000228918 FAM212BQ9NTI7 297 aaPredicted RBP14.08□□□□□ -0.15
LTBR-201ENST00000228918 GPR137BO60478 399 aa14.08□□□□□ -0.16
LTBR-201ENST00000228918 PDCD6O75340 191 aa14.08□□□□□ -0.16
LTBR-201ENST00000228918 DIRAS3O95661 229 aa14.08□□□□□ -0.16
LTBR-201ENST00000228918 P04436 131 aa14.08□□□□□ -0.16
LTBR-201ENST00000228918 CFIP05156 583 aa14.08□□□□□ -0.16
LTBR-201ENST00000228918 UCP3P55916 312 aa14.08□□□□□ -0.16
LTBR-201ENST00000228918 SNRPEP62304 92 aaKnown RBP14.08□□□□□ -0.16
LTBR-201ENST00000228918 HABP2Q14520 560 aaPredicted RBP14.08□□□□□ -0.16
LTBR-201ENST00000228918 FAM76BQ5HYJ3 339 aa14.08□□□□□ -0.16
LTBR-201ENST00000228918 TCEAL3Q969E4 200 aa14.08□□□□□ -0.16
LTBR-201ENST00000228918 ZDHHC8Q9ULC8 765 aa14.08□□□□□ -0.16
LTBR-201ENST00000228918 SLC7A11Q9UPY5 501 aa14.08□□□□□ -0.16
LTBR-201ENST00000228918 LRRC3CA6NJW4 275 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 XRCC2O43543 280 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 SEC11BP0C7V7 166 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 RIPPLY2Q5TAB7 128 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 PLCXD3Q63HM9 321 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 OR11L1Q8NGX0 322 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 WFDC1Q9HC57 220 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 STARD10Q9Y365 291 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 CCDC163A0A0D9SF12 145 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 COLCA2A8K830 154 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 S100A9P06702 114 aaKnown RBP14.07□□□□□ -0.16
LTBR-201ENST00000228918 RFPL3SP0C7P2 107 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 TCN2P20062 427 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 DUSP1P28562 367 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 P2RY1P47900 373 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 RBM11P57052 281 aaKnown RBP14.07□□□□□ -0.16
LTBR-201ENST00000228918 MALLQ13021 153 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 GPR157Q5UAW9 335 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 RBMS3Q6XE24 437 aaKnown RBP14.07□□□□□ -0.16
LTBR-201ENST00000228918 LGI3Q8N145 548 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 OR52M1Q8NGK5 317 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 OR10D3Q8NH80 312 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 OR2V1Q8NHB1 315 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 SYT3Q9BQG1 590 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 GINS3Q9BRX5 216 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 PARP12Q9H0J9 701 aaKnown RBP14.07□□□□□ -0.16
LTBR-201ENST00000228918 CACFD1Q9UGQ2 172 aa14.07□□□□□ -0.16
LTBR-201ENST00000228918 BORCS7-ASMTA0A0B4J1R7 106 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 ZNF816-ZNF321PA0A0X1KG74 233 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 C5orf52A6NGY3 159 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 ZNF806P0C7X5 589 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 DANCRP0C864 163 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 GLI4P10075 376 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 EDN3P14138 238 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms