RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 CLPPQ16740 277 aaPredicted RBP10.17□□□□□ -0.78
NOD1-201ENST00000222823 SDK2Q58EX2 2172 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 KHDC1LQ5JSQ8 128 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 STUMQ69YW2 141 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 C19orf48Q6RUI8 117 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 ZNF574Q6ZN55 896 aaPredicted RBP10.17□□□□□ -0.78
NOD1-201ENST00000222823 NECAP1Q8NC96 275 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 ZNF251Q9BRH9 671 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 HES7Q9BYE0 225 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 THSD7BQ9C0I4 1608 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 NIT2Q9NQR4 276 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 FZR1Q9UM11 496 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 INTS1Q8N201 2190 aaKnown RBP10.17□□□□□ -0.78
NOD1-201ENST00000222823 SCO1O75880 301 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 PPP1CBP62140 327 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 MPPED2Q15777 294 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 LYG1Q8N1E2 194 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 V9GYS6 101 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 ADAM10O14672 748 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 ONECUT2O95948 504 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 HRASP01112 189 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 CYC1P08574 325 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 ACAA2P42765 397 aaKnown RBP10.17□□□□□ -0.78
NOD1-201ENST00000222823 KCNJ3P48549 501 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 TLE1Q04724 770 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 CLEC12BQ2HXU8 276 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 TMEM108Q6UXF1 575 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 SKA3Q8IX90 412 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 C9orf40Q8IXQ3 194 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 TMEM104Q8NE00 496 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 APOBEC4Q8WW27 367 aaKnown RBP10.17□□□□□ -0.78
NOD1-201ENST00000222823 TMEM230Q96A57 120 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 CTDSP1Q9GZU7 261 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 KCNK15Q9H427 330 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.17□□□□□ -0.78
NOD1-201ENST00000222823 PSG11Q9UQ72 335 aa10.17□□□□□ -0.78
NOD1-201ENST00000222823 SCN5AQ14524 2016 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 ACACAQ13085 2346 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 MMP16P51512 607 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 SOX8P57073 446 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 PDZD11Q5EBL8 140 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 OR13D1Q8NGV5 346 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 ACY3Q96HD9 319 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 RYDENQ9NUL5 291 aaKnown RBP10.16□□□□□ -0.78
NOD1-201ENST00000222823 UQCC1Q9NVA1 299 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 UBE2L5PA0A1B0GUS4 154 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 TMEM229AB2RXF0 380 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 FCGR3BO75015 233 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 TXNDC12O95881 172 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 HLXQ14774 488 aaPredicted RBP10.16□□□□□ -0.78
NOD1-201ENST00000222823 GGNBP1Q5YKI7 109 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 NCR3LG1Q68D85 454 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 MOB3BQ86TA1 216 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 ZBTB44Q8NCP5 570 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 RAB40CQ96S21 281 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 OR51I2Q9H344 312 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 ESRP2Q9H6T0 727 aaKnown RBP10.16□□□□□ -0.78
NOD1-201ENST00000222823 NAA60Q9H7X0 242 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 DEFB108AA8MXU0 73 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 ADAM20O43506 726 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 ASCL1P50553 236 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 VMA21Q3ZAQ7 101 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 CD200R1LQ6Q8B3 271 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 NHLRC1Q6VVB1 395 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 TMEM91Q6ZNR0 172 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 TUSC5Q8IXB3 177 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 LRRC29Q8WV35 223 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 ASB5Q8WWX0 329 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 NTNG2Q96CW9 530 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 UCN2Q96RP3 112 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 PPP1R3EQ9H7J1 279 aa10.16□□□□□ -0.78
NOD1-201ENST00000222823 TRAV8-7A0A075B6U6 113 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 C3orf85A0A1B0GTC6 90 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 A0A1W2PPQ1 181 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 C21orf140B9A014 251 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 LPAR6P43657 344 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 ANXA10Q9UJ72 324 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 NBASA2RRP1 2371 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 M0R296 226 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 SOCS1O15524 211 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 ADAP1O75689 374 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 BGLAPP02818 100 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 HNF1AP20823 631 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 CALCRP30988 508 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 OR3A1P47881 315 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 KLF3P57682 345 aaPredicted RBP10.15□□□□□ -0.78
NOD1-201ENST00000222823 CCL17Q92583 94 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 HES4Q9HCC6 221 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 H0Y8G0 127 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 RNASEK-C17orf49H0YIS7 233 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 CTDSPLO15194 276 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 OR5AC1P0C628 307 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 MAGEA5P43359 124 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 GUK1Q16774 197 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 OR2C3Q8N628 320 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 COMMD1Q8N668 190 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 OR5C1Q8NGR4 320 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 RNF133Q8WVZ7 376 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 AKR1E2Q96JD6 320 aa10.15□□□□□ -0.78
NOD1-201ENST00000222823 MYOZ1Q9NP98 299 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms