RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	BLMH	Q13867	455 aa		12.35	□□□□□ -0.43
PHGDH-231	ENST00000641939	TMPRSS11A	Q6ZMR5	421 aa		12.35	□□□□□ -0.43
PHGDH-231	ENST00000641939	PDZD9	Q8IXQ8	264 aa		12.35	□□□□□ -0.43
PHGDH-231	ENST00000641939	MKX	Q8IYA7	352 aa		12.35	□□□□□ -0.43
PHGDH-231	ENST00000641939		Q8IYB0	196 aa		12.35	□□□□□ -0.43
PHGDH-231	ENST00000641939	OPALIN	Q96PE5	141 aa		12.35	□□□□□ -0.43
PHGDH-231	ENST00000641939	PDCD1LG2	Q9BQ51	273 aa		12.35	□□□□□ -0.43
PHGDH-231	ENST00000641939	FAM234A	Q9H0X4	552 aa		12.35	□□□□□ -0.43
PHGDH-231	ENST00000641939	ZCCHC4	Q9H5U6	513 aa		12.35	□□□□□ -0.43
PHGDH-231	ENST00000641939	CAB39	Q9Y376	341 aa	Predicted RBP	12.35	□□□□□ -0.43
PHGDH-231	ENST00000641939	FBN3	Q75N90	2809 aa		12.35	□□□□□ -0.43
PHGDH-231	ENST00000641939		H0YAE9	185 aa		12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	HOXA3	O43365	443 aa	Predicted RBP	12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	MT-ND2	P03891	347 aa		12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	TK1	P04183	234 aa		12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	MYL12A	P19105	171 aa		12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	POU3F4	P49335	361 aa		12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	GTF2A1	P52655	376 aa	Predicted RBP	12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	RPL31	P62899	125 aa	Known RBP	12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	GUCA2A	Q02747	115 aa		12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	GABPB1	Q06547	395 aa	Predicted RBP	12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939		Q6YL49	198 aa		12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	C8orf59	Q8N0T1	100 aa	Predicted RBP	12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	FAM185A	Q8N0U4	392 aa		12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	OR5D14	Q8NGL3	314 aa		12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	OR13C9	Q8NGT0	318 aa		12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	EMG1	Q92979	244 aa	Known RBP	12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	VCX	Q9H320	206 aa		12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	METTL8	Q9H825	291 aa	Known RBP	12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	NEK6	Q9HC98	313 aa		12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	C19orf12	Q9NSK7	152 aa		12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	DIMT1	Q9UNQ2	313 aa	Known RBP	12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	DHDH	Q9UQ10	334 aa		12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	EXOSC1	Q9Y3B2	195 aa	Known RBP	12.34	□□□□□ -0.43
PHGDH-231	ENST00000641939	RNASEK-C17orf49	H0YIS7	233 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939		K7N7A8	449 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	CHRM2	P08172	466 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	GNAO1	P09471	354 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	HKR1	P10072	659 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	BCL3	P20749	454 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	NPBWR2	P48146	333 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	DLX1	P56177	255 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	COL10A1	Q03692	680 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	PRB3	Q04118	309 aa	Predicted RBP	12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	PDZK1IP1	Q13113	114 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	MED21	Q13503	144 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	CCDC58	Q4VC31	144 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	KIAA2026	Q5HYC2	2103 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	OR2G6	Q5TZ20	316 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	NCR3LG1	Q68D85	454 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	RPL22L1	Q6P5R6	122 aa	Known RBP	12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	FIP1L1	Q6UN15	594 aa	Known RBP	12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	SERPINA12	Q8IW75	414 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	PIP4P2	Q8N4L2	257 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	PARP16	Q8N5Y8	322 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	ASCC1	Q8N9N2	400 aa	Known RBP	12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	TBC1D15	Q8TC07	691 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	TSEN15	Q8WW01	171 aa	Known RBP	12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	TNFRSF14	Q92956	283 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	TMEM80	Q96HE8	168 aa		12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	UNKL	Q9H9P5	680 aa	Known RBP	12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939	CHCHD3	Q9NX63	227 aa	Known RBP	12.33	□□□□□ -0.44
PHGDH-231	ENST00000641939		A0A0U1RQK1	487 aa		12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939		A0A1W2PPH5	198 aa		12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	SPRY1	O43609	319 aa	Predicted RBP	12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	ALX3	O95076	343 aa		12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	MELTF	P08582	738 aa		12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	EEF1B2	P24534	225 aa	Known RBP	12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	KLRD1	Q13241	179 aa		12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	CDK5R1	Q15078	307 aa		12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	XAF1	Q6GPH4	301 aa		12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	C16orf87	Q6PH81	154 aa		12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	FAM58A	Q8N1B3	248 aa		12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	TMEM86B	Q8N661	226 aa		12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	OR4M1	Q8NGD0	313 aa		12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	OR5D13	Q8NGL4	314 aa		12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	GGH	Q92820	318 aa		12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	RFT1	Q96AA3	541 aa		12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	SPACA5	Q96QH8	159 aa		12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	SEBOX	Q9HB31	216 aa	Predicted RBP	12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	RBFOX1	Q9NWB1	397 aa	Known RBP	12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	NKX1-2	Q9UD57	310 aa	Predicted RBP	12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	FAM96B	Q9Y3D0	163 aa		12.32	□□□□□ -0.44
PHGDH-231	ENST00000641939	EFCAB10	A6NFE3	127 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	HAX1	O00165	279 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	NPFF	O15130	113 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	SULT1B1	O43704	296 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	ZNF737	O75373	536 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	HAND1	O96004	215 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	HCK	P08631	526 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	PIP	P12273	146 aa	Predicted RBP	12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	PRKACA	P17612	351 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	UBE2E1	P51965	193 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	SLC34A1	Q06495	639 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	ST3GAL4	Q11206	333 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	FOXL1	Q12952	345 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	AWAT1	Q58HT5	328 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	TMEM200B	Q69YZ2	307 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	RNF144B	Q7Z419	303 aa		12.31	□□□□□ -0.44
PHGDH-231	ENST00000641939	OR8H2	Q8N162	312 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms