RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 CALCBP10092 127 aa13.48□□□□□ -0.25
PHGDH-213ENST00000641272 HOXB6P17509 224 aaKnown RBP13.48□□□□□ -0.25
PHGDH-213ENST00000641272 IL24Q13007 206 aa13.48□□□□□ -0.25
PHGDH-213ENST00000641272 ZNF626Q68DY1 528 aa13.48□□□□□ -0.25
PHGDH-213ENST00000641272 C12orf73Q69YU5 71 aa13.48□□□□□ -0.25
PHGDH-213ENST00000641272 GDPD3Q7L5L3 318 aa13.48□□□□□ -0.25
PHGDH-213ENST00000641272 OR13D1Q8NGV5 346 aa13.48□□□□□ -0.25
PHGDH-213ENST00000641272 RPS4Y2Q8TD47 263 aa13.48□□□□□ -0.25
PHGDH-213ENST00000641272 UTP4Q969X6 686 aaKnown RBP13.48□□□□□ -0.25
PHGDH-213ENST00000641272 SLC7A6OSQ96CW6 309 aaPredicted RBP13.48□□□□□ -0.25
PHGDH-213ENST00000641272 CDCA4Q9BXL8 241 aa13.48□□□□□ -0.25
PHGDH-213ENST00000641272 PKIBQ9C010 78 aa13.48□□□□□ -0.25
PHGDH-213ENST00000641272 CHST6Q9GZX3 395 aa13.48□□□□□ -0.25
PHGDH-213ENST00000641272 MMP28Q9H239 520 aa13.48□□□□□ -0.25
PHGDH-213ENST00000641272 MTCH1Q9NZJ7 389 aa13.48□□□□□ -0.25
PHGDH-213ENST00000641272 TBL2Q9Y4P3 447 aaKnown RBP13.48□□□□□ -0.25
PHGDH-213ENST00000641272 TMEM82A0PJX8 343 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 A6NDX4 124 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 FAM90A8PA6NJQ4 464 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 F2RL2O00254 374 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 SYT7O43581 403 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 IGHA1P01876 353 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 ZNF728P0DKX0 622 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 IGHV1-8P0DP01 117 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 CCL1P22362 96 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 POU3F4P49335 361 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 ACTR3P61158 418 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 CNN3Q15417 329 aaKnown RBP13.47□□□□□ -0.25
PHGDH-213ENST00000641272 UBE2V2Q15819 145 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 OXLD1Q5BKU9 147 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 Q6ZPA2 131 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 Q6ZS46 218 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 SLC25A26Q70HW3 274 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 CATSPERDQ86XM0 798 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 GID4Q8IVV7 300 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 OR10H4Q8NGA5 316 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 EMG1Q92979 244 aaKnown RBP13.47□□□□□ -0.25
PHGDH-213ENST00000641272 ITFG2Q969R8 447 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 R3HDM4Q96D70 268 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 NRBF2Q96F24 287 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 ZNF714Q96N38 554 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 SLC7A11Q9UPY5 501 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 HILPDAQ9Y5L2 63 aa13.47□□□□□ -0.25
PHGDH-213ENST00000641272 LOC107986453A0A1B0GWG9 222 aa13.46□□□□□ -0.25
PHGDH-213ENST00000641272 A0A1W2PRX2 142 aa13.46□□□□□ -0.25
PHGDH-213ENST00000641272 VGLL3A8MV65 326 aa13.46□□□□□ -0.25
PHGDH-213ENST00000641272 PIN1P1O15428 100 aa13.46□□□□□ -0.25
PHGDH-213ENST00000641272 DNAJC8O75937 253 aaPredicted RBP13.46□□□□□ -0.25
PHGDH-213ENST00000641272 GABRR1P24046 479 aa13.46□□□□□ -0.25
PHGDH-213ENST00000641272 DUSP1P28562 367 aa13.46□□□□□ -0.25
PHGDH-213ENST00000641272 ACTA2P62736 377 aa13.46□□□□□ -0.25
PHGDH-213ENST00000641272 ACTG2P63267 376 aa13.46□□□□□ -0.25
PHGDH-213ENST00000641272 ACTC1P68032 377 aa13.46□□□□□ -0.25
PHGDH-213ENST00000641272 ACTA1P68133 377 aa13.46□□□□□ -0.25
PHGDH-213ENST00000641272 SLC34A1Q06495 639 aa13.46□□□□□ -0.25
PHGDH-213ENST00000641272 KPRPQ5T749 579 aaPredicted RBP13.46□□□□□ -0.25
PHGDH-213ENST00000641272 OR8H2Q8N162 312 aa13.46□□□□□ -0.25
PHGDH-213ENST00000641272 NDNFQ8TB73 568 aa13.46□□□□□ -0.25
PHGDH-213ENST00000641272 BORCS8Q96FH0 119 aa13.46□□□□□ -0.25
PHGDH-213ENST00000641272 MNTQ99583 582 aa13.46□□□□□ -0.25
PHGDH-213ENST00000641272 CITED2Q99967 270 aaPredicted RBP13.46□□□□□ -0.25
PHGDH-213ENST00000641272 RBFOX1Q9NWB1 397 aaKnown RBP13.46□□□□□ -0.25
PHGDH-213ENST00000641272 A0A1W2PQL4 384 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-213ENST00000641272 FAM172BPA6NC97 362 aa13.45□□□□□ -0.26
PHGDH-213ENST00000641272 DHRS7CA6NNS2 312 aa13.45□□□□□ -0.26
PHGDH-213ENST00000641272 PEX14O75381 377 aa13.45□□□□□ -0.26
PHGDH-213ENST00000641272 HAND1O96004 215 aa13.45□□□□□ -0.26
PHGDH-213ENST00000641272 CHRM2P08172 466 aa13.45□□□□□ -0.26
PHGDH-213ENST00000641272 GRK1Q15835 563 aa13.45□□□□□ -0.26
PHGDH-213ENST00000641272 ATP6AP1Q15904 470 aa13.45□□□□□ -0.26
PHGDH-213ENST00000641272 Q6ZSR3 168 aa13.45□□□□□ -0.26
PHGDH-213ENST00000641272 AMIGO2Q86SJ2 522 aa13.45□□□□□ -0.26
PHGDH-213ENST00000641272 ZNF676Q8N7Q3 588 aa13.45□□□□□ -0.26
PHGDH-213ENST00000641272 OR52N4Q8NGI2 321 aa13.45□□□□□ -0.26
PHGDH-213ENST00000641272 CHST5Q9GZS9 411 aa13.45□□□□□ -0.26
PHGDH-213ENST00000641272 IGHV2-26A0A0B4J1V2 119 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 ADARB2-AS1A8MUL3 147 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 G3V2T6 193 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 GATBO75879 557 aaKnown RBP13.44□□□□□ -0.26
PHGDH-213ENST00000641272 BCL3P20749 454 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 POLR2IP36954 125 aaKnown RBP13.44□□□□□ -0.26
PHGDH-213ENST00000641272 KIR3DL2P43630 455 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 VDAC2P45880 294 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-213ENST00000641272 EFNB1P98172 346 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 TP53I3Q53FA7 332 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 KDM4DQ6B0I6 523 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 BAIAP2L2Q6UXY1 529 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 EGFL6Q8IUX8 553 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 RDH10Q8IZV5 341 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 Q8N2B8 174 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 OR4S1Q8NGB4 309 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 OR11H6Q8NGC7 330 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 MRAPQ8TCY5 172 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 RFT1Q96AA3 541 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 CIB1Q99828 191 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 PRSS22Q9GZN4 317 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 RIBC2Q9H4K1 309 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 GNG8Q9UK08 70 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 PITPNC1Q9UKF7 332 aa13.44□□□□□ -0.26
PHGDH-213ENST00000641272 METTL15A6NJ78 407 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms