RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 SLC22A13Q9Y226 551 aa13.01□□□□□ -0.33
CD99-211ENST00000623253 KMT2CQ8NEZ4 4911 aaKnown RBP13.01□□□□□ -0.33
CD99-211ENST00000623253 K7N7A8 449 aa13□□□□□ -0.33
CD99-211ENST00000623253 NOS1APO75052 506 aaPredicted RBP13□□□□□ -0.33
CD99-211ENST00000623253 DHRS3O75911 302 aa13□□□□□ -0.33
CD99-211ENST00000623253 INMTO95050 263 aa13□□□□□ -0.33
CD99-211ENST00000623253 RIDAP52758 137 aaKnown RBP13□□□□□ -0.33
CD99-211ENST00000623253 ACTA2P62736 377 aa13□□□□□ -0.33
CD99-211ENST00000623253 ACTG2P63267 376 aa13□□□□□ -0.33
CD99-211ENST00000623253 ACTC1P68032 377 aa13□□□□□ -0.33
CD99-211ENST00000623253 ACTA1P68133 377 aa13□□□□□ -0.33
CD99-211ENST00000623253 SLC35A2P78381 396 aa13□□□□□ -0.33
CD99-211ENST00000623253 EDDM3AQ14507 147 aa13□□□□□ -0.33
CD99-211ENST00000623253 PTGES3Q15185 160 aaKnown RBP13□□□□□ -0.33
CD99-211ENST00000623253 CLVS2Q5SYC1 327 aa13□□□□□ -0.33
CD99-211ENST00000623253 GDPD3Q7L5L3 318 aa13□□□□□ -0.33
CD99-211ENST00000623253 ANGPTL5Q86XS5 388 aa13□□□□□ -0.33
CD99-211ENST00000623253 NDNFQ8TB73 568 aa13□□□□□ -0.33
CD99-211ENST00000623253 CNN2Q99439 309 aaKnown RBP13□□□□□ -0.33
CD99-211ENST00000623253 OCSTAMPQ9BR26 566 aa13□□□□□ -0.33
CD99-211ENST00000623253 CADM1Q9BY67 442 aaKnown RBP13□□□□□ -0.33
CD99-211ENST00000623253 KRT84Q9NSB2 600 aa13□□□□□ -0.33
CD99-211ENST00000623253 FAM53CQ9NYF3 392 aa13□□□□□ -0.33
CD99-211ENST00000623253 PQLC2LA1A4F0 135 aa12.99□□□□□ -0.33
CD99-211ENST00000623253 PRKYO43930 277 aa12.99□□□□□ -0.33
CD99-211ENST00000623253 DYNLT3P51808 116 aa12.99□□□□□ -0.33
CD99-211ENST00000623253 MFGE8Q08431 387 aaPredicted RBP12.99□□□□□ -0.33
CD99-211ENST00000623253 KHDC1LQ5JSQ8 128 aa12.99□□□□□ -0.33
CD99-211ENST00000623253 MEPCEQ7L2J0 689 aaKnown RBP12.99□□□□□ -0.33
CD99-211ENST00000623253 ZNF676Q8N7Q3 588 aa12.99□□□□□ -0.33
CD99-211ENST00000623253 TRMT10AQ8TBZ6 339 aaKnown RBP12.99□□□□□ -0.33
CD99-211ENST00000623253 CAPSLQ8WWF8 208 aa12.99□□□□□ -0.33
CD99-211ENST00000623253 ZNF714Q96N38 554 aa12.99□□□□□ -0.33
CD99-211ENST00000623253 MNTQ99583 582 aa12.99□□□□□ -0.33
CD99-211ENST00000623253 HES4Q9HCC6 221 aa12.99□□□□□ -0.33
CD99-211ENST00000623253 H2AFY2Q9P0M6 372 aaPredicted RBP12.99□□□□□ -0.33
CD99-211ENST00000623253 NUFIP1Q9UHK0 495 aaKnown RBP12.99□□□□□ -0.33
CD99-211ENST00000623253 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.99□□□□□ -0.338e-7■■■□□ 14.9
CD99-211ENST00000623253 COPS3Q9UNS2 423 aa12.99□□□□□ -0.33
CD99-211ENST00000623253 FAM230AA0A1W2PPH8 454 aa12.98□□□□□ -0.33
CD99-211ENST00000623253 WI2-2373I1.2A0A1W2PRP0 233 aa12.98□□□□□ -0.33
CD99-211ENST00000623253 PRR32B1ATL7 298 aa12.98□□□□□ -0.33
CD99-211ENST00000623253 DLGAP1O14490 977 aa12.98□□□□□ -0.33
CD99-211ENST00000623253 IGLV3-1P01715 115 aa12.98□□□□□ -0.33
CD99-211ENST00000623253 RBP4P02753 201 aa12.98□□□□□ -0.33
CD99-211ENST00000623253 TTRP02766 147 aa12.98□□□□□ -0.33
CD99-211ENST00000623253 CHRM2P08172 466 aa12.98□□□□□ -0.33
CD99-211ENST00000623253 CD24P25063 80 aa12.98□□□□□ -0.33
CD99-211ENST00000623253 ACTR3P61158 418 aa12.98□□□□□ -0.33
CD99-211ENST00000623253 ATP6AP1Q15904 470 aa12.98□□□□□ -0.33
CD99-211ENST00000623253 NXNL2Q5VZ03 156 aa12.98□□□□□ -0.33
CD99-211ENST00000623253 TSSC4Q9Y5U2 329 aaPredicted RBP12.98□□□□□ -0.33
CD99-211ENST00000623253 hADV38S2A0JD32 116 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 ZAR1LA6NP61 321 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 LOC110117498-PIK3R3F6TDL0 507 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 G3V2T6 193 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 MITFO75030 526 aaPredicted RBP12.97□□□□□ -0.33
CD99-211ENST00000623253 AZGP1P25311 298 aaKnown RBP12.97□□□□□ -0.33
CD99-211ENST00000623253 HOXD3P31249 432 aaPredicted RBP12.97□□□□□ -0.33
CD99-211ENST00000623253 RASSF2P50749 326 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 KRTAP10-11P60412 298 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 CD69Q07108 199 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 BNIP1Q12981 228 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 TCTEX1D4Q5JR98 221 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 BCL2L15Q5TBC7 163 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 MINOS1Q5TGZ0 78 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 AADACL4Q5VUY2 407 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 SLX4IPQ5VYV7 408 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 ZNF322Q6U7Q0 402 aaPredicted RBP12.97□□□□□ -0.33
CD99-211ENST00000623253 TPRX1Q8N7U7 411 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 TCEANCQ8N8B7 351 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 STMN2Q93045 179 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 MYDGFQ969H8 173 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 RCC1LQ96I51 464 aaKnown RBP12.97□□□□□ -0.33
CD99-211ENST00000623253 MOB1AQ9H8S9 216 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 ENOPH1Q9UHY7 261 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 MINOS1-NBL1R4GNA1 71 aa12.97□□□□□ -0.33
CD99-211ENST00000623253 IGHV2-26A0A0B4J1V2 119 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 F8VVB4 439 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 F8VWA3 439 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 MAGEB4O15481 346 aaPredicted RBP12.96□□□□□ -0.33
CD99-211ENST00000623253 ZNF737O75373 536 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 CLIC3O95833 236 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 LPLP06858 475 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 MPZP25189 248 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 FASP25445 335 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 CXCR4P61073 352 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 ERVK11-1P61568 191 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 EFNB1P98172 346 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 IL24Q13007 206 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 TMEM42Q69YG0 159 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 C12orf73Q69YU5 71 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 KDM4DQ6B0I6 523 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 BCDIN3DQ7Z5W3 292 aaKnown RBP12.96□□□□□ -0.33
CD99-211ENST00000623253 ZDHHC13Q8IUH4 622 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 GID4Q8IVV7 300 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 SLC35F2Q8IXU6 374 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 OR8H2Q8N162 312 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 OR4X2Q8NGF9 303 aa12.96□□□□□ -0.33
CD99-211ENST00000623253 TMEM163Q8TC26 289 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms