RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 GDF7Q7Z4P5 450 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 BEND2Q8NDZ0 799 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 TFF2Q03403 129 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 SLC25A19Q9HC21 320 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 LMTK2Q8IWU2 1503 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 IGSF23A1L1A6 192 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 SLC2A10O95528 541 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 GFERP55789 205 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 JMJD6Q6NYC1 403 aaPredicted RBP11.31□□□□□ -0.6
TCF4-248ENST00000616053 ISCA2Q86U28 154 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 MAP1LC3CQ9BXW4 147 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 C20orf141Q9NUB4 165 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 SPHKAPQ2M3C7 1700 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 MC5RP33032 325 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 RPL32P62910 135 aaKnown RBP11.31□□□□□ -0.6
TCF4-248ENST00000616053 C16orf82Q7Z2V1 217 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 OR52N1Q8NH53 320 aa11.31□□□□□ -0.6
TCF4-248ENST00000616053 FAM27D1Q5T7N8 215 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 OR8A1Q8NGG7 326 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 ALX4Q9H161 411 aaPredicted RBP11.3□□□□□ -0.6
TCF4-248ENST00000616053 ZNF665Q9H7R5 613 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 WNT16Q9UBV4 365 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 ABCA4P78363 2273 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 K7ESM1 405 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 TAAR5O14804 337 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 CST5P28325 142 aaPredicted RBP11.3□□□□□ -0.6
TCF4-248ENST00000616053 GSCP56915 257 aaPredicted RBP11.3□□□□□ -0.6
TCF4-248ENST00000616053 ALKBH7Q9BT30 221 aaPredicted RBP11.3□□□□□ -0.6
TCF4-248ENST00000616053 PHLDA3Q9Y5J5 127 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 TMEM56-RWDD3S4R434 201 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 FFAR1O14842 300 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 ACAA1P09110 424 aaPredicted RBP11.3□□□□□ -0.6
TCF4-248ENST00000616053 HCCSP53701 268 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 HIST1H3AP68431 136 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 DCAF12L2Q5VW00 463 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 NTNG2Q96CW9 530 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 DICER1Q9UPY3 1922 aaKnown RBP11.3□□□□□ -0.6
TCF4-248ENST00000616053 FRMPD1Q5SYB0 1578 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 CORTO00230 105 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 ZNF354AO60765 605 aaPredicted RBP11.3□□□□□ -0.6
TCF4-248ENST00000616053 LEXMQ3ZCV2 418 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 SHISA5Q8N114 240 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 TP53RKQ96S44 253 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 MDH2P40926 338 aaKnown RBP11.3□□□□□ -0.6
TCF4-248ENST00000616053 SPINK14Q6IE38 97 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 SPNS1Q9H2V7 528 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 GLIPR2Q9H4G4 154 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 FGF22Q9HCT0 170 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 RNF7Q9UBF6 113 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 CDAP32320 146 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 LPAR6P43657 344 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 IGDCC3Q8IVU1 814 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 C3orf56Q8N813 242 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 GDF2Q9UK05 429 aaPredicted RBP11.3□□□□□ -0.6
TCF4-248ENST00000616053 NMUP48645 174 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 EMC4Q5J8M3 183 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 FAM26EQ8N5C1 309 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 POM121Q96HA1 1249 aa11.3□□□□□ -0.6
TCF4-248ENST00000616053 IGHV3-21A0A0B4J1V1 117 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 FAM189A1O60320 539 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 RAF1P04049 648 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 HTR1FP30939 366 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 NXPH1P58417 271 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 ZNF56Q15929 161 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 CTU2Q2VPK5 515 aaKnown RBP11.29□□□□□ -0.6
TCF4-248ENST00000616053 SLC16A13Q7RTY0 426 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 TTC9CQ8N5M4 171 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 PRELID3AQ96N28 172 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 IL21Q9HBE4 155 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 CNOT2Q9NZN8 540 aaKnown RBP11.29□□□□□ -0.6
TCF4-248ENST00000616053 EXOGQ9Y2C4 368 aaKnown RBP11.29□□□□□ -0.6
TCF4-248ENST00000616053 CHD1O14646 1710 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 LMO7DNF2Z398 122 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 PTGESO14684 152 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 BTG2P78543 158 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 WDR74Q6RFH5 385 aaPredicted RBP11.29□□□□□ -0.6
TCF4-248ENST00000616053 OR5AP2Q8NGF4 316 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 OR4A5Q8NH83 315 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 DMRTA2Q96SC8 542 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 PI4KAP42356 2102 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 CD1EP15812 388 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 PPICP45877 212 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 TMEM52BQ4KMG9 183 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 ZBTB37Q5TC79 503 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 TMEM59LQ9UK28 342 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 CICQ96RK0 1608 aaPredicted RBP11.29□□□□□ -0.6
TCF4-248ENST00000616053 DMRTC1Q5HYR2 192 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 FAM74A4Q5TZK3 123 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 MARC2Q969Z3 335 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 LPAR3Q9UBY5 353 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 DIMT1Q9UNQ2 313 aaKnown RBP11.29□□□□□ -0.6
TCF4-248ENST00000616053 DIP2BQ9P265 1576 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 IGHV3OR16-10A0A075B7F0 116 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 POM121BA6NF01 834 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 SNRPGP15A8MWD9 76 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 JOSD1Q15040 202 aaPredicted RBP11.29□□□□□ -0.6
TCF4-248ENST00000616053 NPWQ8N729 165 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 TBX15Q96SF7 602 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 FSCN3Q9NQT6 498 aa11.29□□□□□ -0.6
TCF4-248ENST00000616053 A4GNTQ9UNA3 340 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms