RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 RSU1Q15404 277 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 SWI5Q1ZZU3 235 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 SLC22A6Q4U2R8 563 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 ELP2Q6IA86 826 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 HAGHLQ6PII5 290 aaPredicted RBP9.67□□□□□ -0.86
SLIRP-212ENST00000613856 CMTM4Q8IZR5 234 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 OR2Z1Q8NG97 314 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 OR4M1Q8NGD0 313 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 OR51F2Q8NH61 342 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 AQP3Q92482 292 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 FBXW5Q969U6 566 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 MRPS24Q96EL2 167 aaKnown RBP9.67□□□□□ -0.86
SLIRP-212ENST00000613856 MEGF10Q96KG7 1140 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 NUDT16L1Q9BRJ7 211 aaKnown RBP9.67□□□□□ -0.86
SLIRP-212ENST00000613856 TM2D1Q9BX74 207 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 TMEM59Q9BXS4 323 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 BEX4Q9NWD9 120 aaPredicted RBP9.67□□□□□ -0.86
SLIRP-212ENST00000613856 EXTL2Q9UBQ6 330 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 IL19Q9UHD0 177 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 EDARQ9UNE0 448 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 ING4Q9UNL4 249 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 NBEAL1Q6ZS30 2694 aa9.67□□□□□ -0.86
SLIRP-212ENST00000613856 METTL21EPA6NDL7 271 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 AKR7A2O43488 359 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 ANGPTL7O43827 346 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 NOS1APO75052 506 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-212ENST00000613856 MPIG6BO95866 241 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 PLATP00750 562 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 MGMTP16455 207 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 SERPINA2P20848 420 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 CD40LGP29965 261 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 MST1LQ2TV78 715 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 NHLRC3Q5JS37 347 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 FAM209AQ5JX71 171 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 OR10K2Q6IF99 312 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 RAB12Q6IQ22 244 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 Q8IYB0 196 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 FBXL14Q8N1E6 418 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 MUC15Q8N387 334 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 SCCPDHQ8NBX0 429 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 TMEM104Q8NE00 496 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 FAM46BQ96A09 425 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 S100A16Q96FQ6 103 aaKnown RBP9.66□□□□□ -0.86
SLIRP-212ENST00000613856 PERPQ96FX8 193 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 Q96M66 194 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 URM1Q9BTM9 101 aaKnown RBP9.66□□□□□ -0.86
SLIRP-212ENST00000613856 LPAR5Q9H1C0 372 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 ELL3Q9HB65 397 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-212ENST00000613856 FAIMQ9NVQ4 179 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 CR1P17927 2039 aa9.66□□□□□ -0.86
SLIRP-212ENST00000613856 A0A1W2PP11 408 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 FABP12A6NFH5 140 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 RNF212BA8MTL3 300 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 TRAPPC2LH3BP13 241 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 XRCC3O43542 346 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 SPRY3O43610 288 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 SYNGR1O43759 233 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 CRTAPO75718 401 aaPredicted RBP9.65□□□□□ -0.86
SLIRP-212ENST00000613856 CSTBP04080 98 aaKnown RBP9.65□□□□□ -0.86
SLIRP-212ENST00000613856 SFTPBP07988 381 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 CHRM2P08172 466 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 PGA5P0DJD9 388 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 GTF2F2P13984 249 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 CPT2P23786 658 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 CDK2P24941 298 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 CFHR2P36980 270 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 PPOXP50336 477 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 FGF12P61328 243 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 ERVK11-1P61568 191 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 SNRPD2P62316 118 aaKnown RBP9.65□□□□□ -0.86
SLIRP-212ENST00000613856 TNFAIP6P98066 277 aaPredicted RBP9.65□□□□□ -0.86
SLIRP-212ENST00000613856 ZNF79Q15937 498 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 PCGF3Q3KNV8 242 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 PRAMEF6Q5VXH4 476 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 PYHIN1Q6K0P9 492 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 FAM131AQ6UXB0 335 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 DTX2Q86UW9 622 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 C11orf53Q8IXP5 236 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 OSR2Q8N2R0 312 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 FAM89BQ8N5H3 189 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 POC1AQ8NBT0 407 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 OR51T1Q8NGJ9 327 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 OR10K1Q8NGX5 313 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 OR10Z1Q8NGY1 313 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 Q8TCH9 128 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 C15orf40Q8WUR7 153 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 ERGIC1Q969X5 290 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 SLAMF9Q96A28 289 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 OR2V2Q96R30 315 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 NRIP2Q9BQI9 281 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 SRRQ9GZT4 340 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 ATG5Q9H1Y0 275 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 MS4A5Q9H3V2 200 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 DYNLRB1Q9NP97 96 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 DIABLOQ9NR28 239 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 MTCH1Q9NZJ7 389 aa9.65□□□□□ -0.86
SLIRP-212ENST00000613856 DYSFO75923 2080 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 FAM90A10PA6NDY2 464 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 FAM90A18PA6NE21 464 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 FAM90A16PA6NEW6 464 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms