RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 DVL1O14640 695 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 SFTPDP35247 375 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 CD200P41217 278 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 KISS1Q15726 138 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 SNIP1Q8TAD8 396 aaKnown RBP10.88□□□□□ -0.67
CDCA3-212ENST00000604599 SNHG12Q9BXW3 62 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 ADAMTS9Q9P2N4 1935 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 IGSF23A1L1A6 192 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 ZNF850A8MQ14 1090 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 SERPINE3A8MV23 424 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 ZNF728P0DKX0 622 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 PNLIPP16233 465 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 ZNF266Q14584 549 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 ZNF506Q5JVG8 444 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 OR2C3Q8N628 320 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 TMEM217Q8N7C4 229 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 OR11L1Q8NGX0 322 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 PLEKHJ1Q9NW61 149 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 FOXI3A8MTJ6 420 aaPredicted RBP10.87□□□□□ -0.67
CDCA3-212ENST00000604599 CLDN34H7C241 214 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 MSTNO14793 375 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 FOLR1P15328 257 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 ZNF43P17038 809 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 CDAP32320 146 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 ECI1P42126 302 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 FAM189A2Q15884 450 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 ZNF542PQ5EBM4 170 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 FAM57BQ71RH2 274 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 BEND2Q8NDZ0 799 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 OR4X1Q8NH49 305 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 CLDND2Q8NHS1 167 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 SLC37A2Q8TED4 501 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 CABLES2Q9BTV7 478 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 ANXA10Q9UJ72 324 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 C5orf63A6NC05 138 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 CST7O76096 145 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 MBP02144 154 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 CELA2BP08218 269 aaPredicted RBP10.87□□□□□ -0.67
CDCA3-212ENST00000604599 MMP7P09237 267 aaPredicted RBP10.87□□□□□ -0.67
CDCA3-212ENST00000604599 PGA3P0DJD8 388 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 ZNF25P17030 456 aaPredicted RBP10.87□□□□□ -0.67
CDCA3-212ENST00000604599 DAP3P51398 398 aaKnown RBP10.87□□□□□ -0.67
CDCA3-212ENST00000604599 BIDP55957 195 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 HSF1Q00613 529 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 TMEM31Q5JXX7 168 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 TSLPQ969D9 159 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 RCC1LQ96I51 464 aaKnown RBP10.87□□□□□ -0.67
CDCA3-212ENST00000604599 MAGT1Q9H0U3 335 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 METTL9Q9H1A3 318 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 SLC2A9Q9NRM0 540 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 CBLN4Q9NTU7 201 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 LHFPL6Q9Y693 200 aa10.87□□□□□ -0.67
CDCA3-212ENST00000604599 C2orf72A6NCS6 295 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 FRG2CA6NGY1 282 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 PHF1O43189 567 aaPredicted RBP10.86□□□□□ -0.67
CDCA3-212ENST00000604599 MMP9P14780 707 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 TLE3Q04726 772 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 LIAT1Q6ZQX7 453 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 OR5C1Q8NGR4 320 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 BMFQ96LC9 184 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 PPP1R14DQ9NXH3 145 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 ZNF581Q9P0T4 197 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 GNG13Q9P2W3 67 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 GAB2Q9UQC2 676 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 ASCC3Q8N3C0 2202 aaKnown RBP10.86□□□□□ -0.67
CDCA3-212ENST00000604599 RER1O15258 196 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 EPHA1P21709 976 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 HOXA6P31267 233 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 HSD17B7P56937 341 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 H3F3AP84243 136 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 COL10A1Q03692 680 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 PLCXD2Q0VAA5 305 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 TAF9Q16594 264 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 WDR25Q64LD2 544 aaPredicted RBP10.86□□□□□ -0.67
CDCA3-212ENST00000604599 ARMC6Q6NXE6 501 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 GRINAQ7Z429 371 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 SLC35G3Q8N808 338 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 SLC38A9Q8NBW4 561 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 C18orf12Q96KH6 178 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 DEFB118Q96PH6 123 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 ACTR3CQ9C0K3 210 aaPredicted RBP10.86□□□□□ -0.67
CDCA3-212ENST00000604599 CALHM2Q9HA72 323 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 REV3LO60673 3130 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 KIAA2026Q5HYC2 2103 aa10.86□□□□□ -0.67
CDCA3-212ENST00000604599 ZFP92A6NM28 416 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 E9PLN8 166 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 SSSCA1O60232 199 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 NXPH3O95157 252 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 KLF8O95600 359 aaPredicted RBP10.85□□□□□ -0.67
CDCA3-212ENST00000604599 HNRNPA1P09651 372 aaKnown RBP eCLIP10.85□□□□□ -0.67
CDCA3-212ENST00000604599 OR4A8P0C604 315 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 TUBG1P23258 451 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 CRIP3Q6Q6R5 217 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 CMTM1Q8IZ96 169 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 OR1P1Q8NH06 330 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 RNASEH2CQ8TDP1 164 aaKnown RBP10.85□□□□□ -0.67
CDCA3-212ENST00000604599 DYRK2Q92630 601 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 PIGTQ969N2 578 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 ADIPOR1Q96A54 375 aa10.85□□□□□ -0.67
CDCA3-212ENST00000604599 MSI2Q96DH6 328 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms