RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 CD37P11049 281 aa18.12■□□□□ 0.49
UPF1-207ENST00000599848 RPS27P42677 84 aaKnown RBP18.12■□□□□ 0.49
UPF1-207ENST00000599848 WNT2BQ93097 391 aa18.12■□□□□ 0.49
UPF1-207ENST00000599848 TTTY12Q9BZ98 90 aa18.12■□□□□ 0.49
UPF1-207ENST00000599848 LPAR2Q9HBW0 351 aa18.12■□□□□ 0.49
UPF1-207ENST00000599848 TMEM167BQ9NRX6 74 aa18.12■□□□□ 0.49
UPF1-207ENST00000599848 OR2W5A6NFC9 320 aa18.12■□□□□ 0.49
UPF1-207ENST00000599848 PATE3B3GLJ2 98 aa18.12■□□□□ 0.49
UPF1-207ENST00000599848 P2RX3P56373 397 aa18.12■□□□□ 0.49
UPF1-207ENST00000599848 GGTLC2Q14390 218 aa18.12■□□□□ 0.49
UPF1-207ENST00000599848 GPR35Q9HC97 309 aa18.12■□□□□ 0.49
UPF1-207ENST00000599848 CD3DP04234 171 aa18.11■□□□□ 0.49
UPF1-207ENST00000599848 MNX1P50219 401 aaPredicted RBP18.11■□□□□ 0.49
UPF1-207ENST00000599848 ASCL1P50553 236 aa18.11■□□□□ 0.49
UPF1-207ENST00000599848 TJP1Q07157 1748 aa18.11■□□□□ 0.49
UPF1-207ENST00000599848 GPNMBQ14956 572 aa18.11■□□□□ 0.49
UPF1-207ENST00000599848 RPUSD4Q96CM3 377 aaKnown RBP18.11■□□□□ 0.49
UPF1-207ENST00000599848 FLYWCH2Q96CP2 140 aaKnown RBP18.11■□□□□ 0.49
UPF1-207ENST00000599848 TINAGL1Q9GZM7 467 aaPredicted RBP18.11■□□□□ 0.49
UPF1-207ENST00000599848 RAB33BQ9H082 229 aa18.11■□□□□ 0.49
UPF1-207ENST00000599848 RASL12Q9NYN1 266 aa18.11■□□□□ 0.49
UPF1-207ENST00000599848 GLI4P10075 376 aa18.11■□□□□ 0.49
UPF1-207ENST00000599848 KIR3DL2P43630 455 aa18.11■□□□□ 0.49
UPF1-207ENST00000599848 ADGRL4Q9HBW9 690 aa18.11■□□□□ 0.49
UPF1-207ENST00000599848 CLCF1Q9UBD9 225 aa18.11■□□□□ 0.49
UPF1-207ENST00000599848 UBE2L5PA0A1B0GUS4 154 aa18.11■□□□□ 0.49
UPF1-207ENST00000599848 OR5A2Q8NGI9 324 aa18.11■□□□□ 0.49
UPF1-207ENST00000599848 LYZP61626 148 aa18.11■□□□□ 0.49
UPF1-207ENST00000599848 H3F3CQ6NXT2 135 aa18.11■□□□□ 0.49
UPF1-207ENST00000599848 DGCR2P98153 550 aa18.1■□□□□ 0.49
UPF1-207ENST00000599848 SLC38A11Q08AI6 406 aa18.1■□□□□ 0.49
UPF1-207ENST00000599848 TSPAN32Q96QS1 320 aa18.1■□□□□ 0.49
UPF1-207ENST00000599848 ZNF275Q9NSD4 429 aaPredicted RBP18.1■□□□□ 0.49
UPF1-207ENST00000599848 TMEM123Q8N131 208 aa18.1■□□□□ 0.49
UPF1-207ENST00000599848 ZFP62Q8NB50 900 aaPredicted RBP18.1■□□□□ 0.49
UPF1-207ENST00000599848 OR5AP2Q8NGF4 316 aa18.1■□□□□ 0.49
UPF1-207ENST00000599848 POM121CA8CG34 1229 aa18.1■□□□□ 0.49
UPF1-207ENST00000599848 CRHP06850 196 aa18.1■□□□□ 0.49
UPF1-207ENST00000599848 ZNF883P0CG24 379 aa18.1■□□□□ 0.49
UPF1-207ENST00000599848 SPCS3P61009 180 aa18.1■□□□□ 0.49
UPF1-207ENST00000599848 FSCN3Q9NQT6 498 aa18.1■□□□□ 0.49
UPF1-207ENST00000599848 PEX11BO96011 259 aa18.1■□□□□ 0.49
UPF1-207ENST00000599848 PMP22Q01453 160 aa18.1■□□□□ 0.49
UPF1-207ENST00000599848 FAM214BQ7L5A3 538 aa18.1■□□□□ 0.49
UPF1-207ENST00000599848 SLC7A10Q9NS82 523 aa18.1■□□□□ 0.49
UPF1-207ENST00000599848 SNRPNP63162 240 aaKnown RBP18.09■□□□□ 0.49
UPF1-207ENST00000599848 BAP18Q8IXM2 172 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 SMIM4Q8WVI0 70 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 MAGT1Q9H0U3 335 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 DUSP21Q9H596 190 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 CELA2BP08218 269 aaPredicted RBP18.09■□□□□ 0.49
UPF1-207ENST00000599848 FGF5P12034 268 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 NAAAQ02083 359 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 OR5M8Q8NGP6 311 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 UBE2FQ969M7 185 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 AUNIPQ9H7T9 357 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 ASB1Q9Y576 335 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 NME2P1O60361 137 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 SLC25A35Q3KQZ1 300 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 LYRM7Q5U5X0 104 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 MUC15Q8N387 334 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 IGFBP6P24592 240 aaPredicted RBP18.09■□□□□ 0.49
UPF1-207ENST00000599848 FMODQ06828 376 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 FABP9Q0Z7S8 132 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 HAGHQ16775 308 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 C12orf73Q69YU5 71 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 OR2H1Q9GZK4 316 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 SIRT5Q9NXA8 310 aa18.09■□□□□ 0.49
UPF1-207ENST00000599848 ING1Q9UK53 422 aaPredicted RBP18.09■□□□□ 0.49
UPF1-207ENST00000599848 DEFB108AA8MXU0 73 aa18.08■□□□□ 0.49
UPF1-207ENST00000599848 MAGEB4O15481 346 aaPredicted RBP18.08■□□□□ 0.49
UPF1-207ENST00000599848 GALR1P47211 349 aa18.08■□□□□ 0.49
UPF1-207ENST00000599848 ERVFC1-1P60608 527 aa18.08■□□□□ 0.49
UPF1-207ENST00000599848 WDR38Q5JTN6 314 aa18.08■□□□□ 0.49
UPF1-207ENST00000599848 FAHD2BQ6P2I3 314 aaPredicted RBP18.08■□□□□ 0.49
UPF1-207ENST00000599848 CALHM1Q8IU99 346 aa18.08■□□□□ 0.49
UPF1-207ENST00000599848 FAM219AQ8IW50 185 aa18.08■□□□□ 0.49
UPF1-207ENST00000599848 FAHD2AQ96GK7 314 aa18.08■□□□□ 0.49
UPF1-207ENST00000599848 JMJD8Q96S16 334 aa18.08■□□□□ 0.49
UPF1-207ENST00000599848 SFXN3Q9BWM7 321 aa18.08■□□□□ 0.49
UPF1-207ENST00000599848 ZNF552Q9H707 407 aaPredicted RBP18.08■□□□□ 0.49
UPF1-207ENST00000599848 ZDHHC8Q9ULC8 765 aa18.08■□□□□ 0.49
UPF1-207ENST00000599848 SIX6O95475 246 aa18.08■□□□□ 0.49
UPF1-207ENST00000599848 YBX1P67809 324 aaKnown RBP18.08■□□□□ 0.49
UPF1-207ENST00000599848 BAMBIQ13145 260 aa18.08■□□□□ 0.49
UPF1-207ENST00000599848 SLC23A3Q6PIS1 610 aa18.08■□□□□ 0.49
UPF1-207ENST00000599848 CCDC71Q8IV32 467 aaPredicted RBP18.08■□□□□ 0.49
UPF1-207ENST00000599848 RNF115Q9Y4L5 304 aa18.08■□□□□ 0.49
UPF1-207ENST00000599848 CNTRLQ7Z7A1 2325 aa18.08■□□□□ 0.49
UPF1-207ENST00000599848 DAOP14920 347 aa18.08■□□□□ 0.48
UPF1-207ENST00000599848 CRISP2P16562 243 aa18.08■□□□□ 0.48
UPF1-207ENST00000599848 EVX1P49640 407 aa18.08■□□□□ 0.48
UPF1-207ENST00000599848 EBLN2Q6P2I7 272 aa18.08■□□□□ 0.48
UPF1-207ENST00000599848 STPG3Q8N7X2 389 aa18.08■□□□□ 0.48
UPF1-207ENST00000599848 MARS2Q96GW9 593 aaKnown RBP18.08■□□□□ 0.48
UPF1-207ENST00000599848 NAGKQ9UJ70 344 aa18.08■□□□□ 0.48
UPF1-207ENST00000599848 TRDCB7Z8K6 153 aa18.08■□□□□ 0.48
UPF1-207ENST00000599848 OR2C1O95371 312 aa18.08■□□□□ 0.48
UPF1-207ENST00000599848 ATP5J2P56134 94 aa18.08■□□□□ 0.48
UPF1-207ENST00000599848 OR2M3Q8NG83 312 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms