RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 CALB2P22676 271 aa17■□□□□ 0.31
PNKP-212ENST00000599454 ACTA2P62736 377 aa17■□□□□ 0.31
PNKP-212ENST00000599454 GNGT1P63211 74 aa17■□□□□ 0.31
PNKP-212ENST00000599454 ACTG2P63267 376 aa17■□□□□ 0.31
PNKP-212ENST00000599454 ACTC1P68032 377 aa17■□□□□ 0.31
PNKP-212ENST00000599454 ACTA1P68133 377 aa17■□□□□ 0.31
PNKP-212ENST00000599454 ZBTB49Q6ZSB9 765 aa17■□□□□ 0.31
PNKP-212ENST00000599454 C16orf82Q7Z2V1 217 aa17■□□□□ 0.31
PNKP-212ENST00000599454 ANGPTL5Q86XS5 388 aa17■□□□□ 0.31
PNKP-212ENST00000599454 HS3ST5Q8IZT8 346 aa17■□□□□ 0.31
PNKP-212ENST00000599454 BATF2Q8N1L9 274 aa17■□□□□ 0.31
PNKP-212ENST00000599454 OR5AU1Q8NGC0 362 aa17■□□□□ 0.31
PNKP-212ENST00000599454 CANT1Q8WVQ1 401 aa17■□□□□ 0.31
PNKP-212ENST00000599454 SNX22Q96L94 193 aa17■□□□□ 0.31
PNKP-212ENST00000599454 CEP19Q96LK0 163 aa17■□□□□ 0.31
PNKP-212ENST00000599454 OCSTAMPQ9BR26 566 aa17■□□□□ 0.31
PNKP-212ENST00000599454 ZKSCAN7Q9P0L1 754 aaPredicted RBP17■□□□□ 0.31
PNKP-212ENST00000599454 SLC7A11Q9UPY5 501 aa17■□□□□ 0.31
PNKP-212ENST00000599454 FAM90A22PA8MWA6 464 aa16.99■□□□□ 0.31
PNKP-212ENST00000599454 PF4V1P10720 104 aa16.99■□□□□ 0.31
PNKP-212ENST00000599454 SLC34A1Q06495 639 aa16.99■□□□□ 0.31
PNKP-212ENST00000599454 IL18R1Q13478 541 aa16.99■□□□□ 0.31
PNKP-212ENST00000599454 Q6ZS46 218 aa16.99■□□□□ 0.31
PNKP-212ENST00000599454 PRRG3Q9BZD7 231 aa16.99■□□□□ 0.31
PNKP-212ENST00000599454 SEBOXQ9HB31 216 aaPredicted RBP16.99■□□□□ 0.31
PNKP-212ENST00000599454 HILPDAQ9Y5L2 63 aa16.99■□□□□ 0.31
PNKP-212ENST00000599454 LINC00312Q9Y6C7 94 aa16.99■□□□□ 0.31
PNKP-212ENST00000599454 SESN1Q9Y6P5 492 aa16.99■□□□□ 0.31
PNKP-212ENST00000599454 IGLL1P15814 213 aa16.98■□□□□ 0.31
PNKP-212ENST00000599454 CCL1P22362 96 aa16.98■□□□□ 0.31
PNKP-212ENST00000599454 PRKACGP22612 351 aa16.98■□□□□ 0.31
PNKP-212ENST00000599454 CRISP1P54107 249 aa16.98■□□□□ 0.31
PNKP-212ENST00000599454 CXCR4P61073 352 aa16.98■□□□□ 0.31
PNKP-212ENST00000599454 TMEM95Q3KNT9 176 aa16.98■□□□□ 0.31
PNKP-212ENST00000599454 VAX1Q5SQQ9 334 aa16.98■□□□□ 0.31
PNKP-212ENST00000599454 TCF23Q7RTU1 214 aa16.98■□□□□ 0.31
PNKP-212ENST00000599454 SLC35F2Q8IXU6 374 aa16.98■□□□□ 0.31
PNKP-212ENST00000599454 ZNF676Q8N7Q3 588 aa16.98■□□□□ 0.31
PNKP-212ENST00000599454 NDNFQ8TB73 568 aa16.98■□□□□ 0.31
PNKP-212ENST00000599454 AKR1E2Q96JD6 320 aa16.98■□□□□ 0.31
PNKP-212ENST00000599454 APOL4Q9BPW4 351 aa16.98■□□□□ 0.31
PNKP-212ENST00000599454 IGHV2-26A0A0B4J1V2 119 aa16.97■□□□□ 0.31
PNKP-212ENST00000599454 FAM230AA0A1W2PPH8 454 aa16.97■□□□□ 0.31
PNKP-212ENST00000599454 ZNF670-ZNF695F2Z2N8 137 aa16.97■□□□□ 0.31
PNKP-212ENST00000599454 MPIG6BO95866 241 aa16.97■□□□□ 0.31
PNKP-212ENST00000599454 SLC35A2P78381 396 aa16.97■□□□□ 0.31
PNKP-212ENST00000599454 SLX4IPQ5VYV7 408 aa16.97■□□□□ 0.31
PNKP-212ENST00000599454 MEPCEQ7L2J0 689 aaKnown RBP16.97■□□□□ 0.31
PNKP-212ENST00000599454 ENTHD1Q8IYW4 607 aa16.97■□□□□ 0.31
PNKP-212ENST00000599454 TRMT10AQ8TBZ6 339 aaKnown RBP16.97■□□□□ 0.31
PNKP-212ENST00000599454 CLEC7AQ9BXN2 247 aa16.97■□□□□ 0.31
PNKP-212ENST00000599454 TMEM133Q9H2Q1 129 aa16.97■□□□□ 0.31
PNKP-212ENST00000599454 PLEKHA1Q9HB21 404 aa16.97■□□□□ 0.31
PNKP-212ENST00000599454 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.97■□□□□ 0.31
PNKP-212ENST00000599454 PAPOLBQ9NRJ5 636 aaKnown RBP16.97■□□□□ 0.31
PNKP-212ENST00000599454 MTCH1Q9NZJ7 389 aa16.97■□□□□ 0.31
PNKP-212ENST00000599454 NBEAL2Q6ZNJ1 2754 aa16.97■□□□□ 0.31
PNKP-212ENST00000599454 A0A1W2PRX2 142 aa16.96■□□□□ 0.31
PNKP-212ENST00000599454 A6NIN4 97 aa16.96■□□□□ 0.31
PNKP-212ENST00000599454 PRKYO43930 277 aa16.96■□□□□ 0.31
PNKP-212ENST00000599454 GATBO75879 557 aaKnown RBP16.96■□□□□ 0.31
PNKP-212ENST00000599454 DUS4LO95620 317 aaKnown RBP16.96■□□□□ 0.31
PNKP-212ENST00000599454 HTR1DP28221 377 aa16.96■□□□□ 0.31
PNKP-212ENST00000599454 PEX2P28328 305 aa16.96■□□□□ 0.31
PNKP-212ENST00000599454 FUT6P51993 359 aa16.96■□□□□ 0.31
PNKP-212ENST00000599454 Q8IYB0 196 aa16.96■□□□□ 0.31
PNKP-212ENST00000599454 CCDC54Q8NEL0 328 aa16.96■□□□□ 0.31
PNKP-212ENST00000599454 NRBF2Q96F24 287 aa16.96■□□□□ 0.31
PNKP-212ENST00000599454 RCC1LQ96I51 464 aaKnown RBP16.96■□□□□ 0.31
PNKP-212ENST00000599454 CADM1Q9BY67 442 aaKnown RBP16.96■□□□□ 0.31
PNKP-212ENST00000599454 LIN7BQ9HAP6 207 aa16.96■□□□□ 0.31
PNKP-212ENST00000599454 CLN6Q9NWW5 311 aa16.96■□□□□ 0.31
PNKP-212ENST00000599454 H2AFY2Q9P0M6 372 aaPredicted RBP16.96■□□□□ 0.31
PNKP-212ENST00000599454 TSSC4Q9Y5U2 329 aaPredicted RBP16.96■□□□□ 0.31
PNKP-212ENST00000599454 TMEM82A0PJX8 343 aa16.95■□□□□ 0.3
PNKP-212ENST00000599454 MEX3AA1L020 520 aaKnown RBP16.95■□□□□ 0.3
PNKP-212ENST00000599454 F8VVB4 439 aa16.95■□□□□ 0.3
PNKP-212ENST00000599454 F8VWA3 439 aa16.95■□□□□ 0.3
PNKP-212ENST00000599454 PF4P02776 101 aa16.95■□□□□ 0.3
PNKP-212ENST00000599454 EDDM3AQ14507 147 aa16.95■□□□□ 0.3
PNKP-212ENST00000599454 NXNL2Q5VZ03 156 aa16.95■□□□□ 0.3
PNKP-212ENST00000599454 CENPVQ7Z7K6 275 aaPredicted RBP16.95■□□□□ 0.3
PNKP-212ENST00000599454 EGFL6Q8IUX8 553 aa16.95■□□□□ 0.3
PNKP-212ENST00000599454 CAPSLQ8WWF8 208 aa16.95■□□□□ 0.3
PNKP-212ENST00000599454 ADGRL4Q9HBW9 690 aa16.95■□□□□ 0.3
PNKP-212ENST00000599454 MRM2Q9UI43 246 aaKnown RBP16.95■□□□□ 0.3
PNKP-212ENST00000599454 TCRBV4S1A1TA0A5B7 111 aa16.94■□□□□ 0.3
PNKP-212ENST00000599454 K7EIL1 84 aa16.94■□□□□ 0.3
PNKP-212ENST00000599454 HAND1O96004 215 aa16.94■□□□□ 0.3
PNKP-212ENST00000599454 JUNBP17275 347 aaPredicted RBP16.94■□□□□ 0.3
PNKP-212ENST00000599454 BRS3P32247 399 aa16.94■□□□□ 0.3
PNKP-212ENST00000599454 ARHGDIBP52566 201 aa16.94■□□□□ 0.3
PNKP-212ENST00000599454 CBX1P83916 185 aa16.94■□□□□ 0.3
PNKP-212ENST00000599454 PTGES3Q15185 160 aaKnown RBP16.94■□□□□ 0.3
PNKP-212ENST00000599454 GRK1Q15835 563 aa16.94■□□□□ 0.3
PNKP-212ENST00000599454 PLEKHG7Q6ZR37 379 aa16.94■□□□□ 0.3
PNKP-212ENST00000599454 EMG1Q92979 244 aaKnown RBP16.94■□□□□ 0.3
PNKP-212ENST00000599454 SLAMF9Q96A28 289 aa16.94■□□□□ 0.3
PNKP-212ENST00000599454 THTPAQ9BU02 230 aa16.94■□□□□ 0.3
PNKP-212ENST00000599454 UBE2J1Q9Y385 318 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms