RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 Q6YL49 198 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 PIP4P2Q8N4L2 257 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 AQP3Q92482 292 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 RNFT2Q96EX2 444 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 DCTN5Q9BTE1 182 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 CHIAQ9BZP6 476 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 PRDM13Q9H4Q3 707 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 UNKLQ9H9P5 680 aaKnown RBP11.32□□□□□ -0.6
SCAF1-203ENST00000598359 NLKQ9UBE8 527 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 A3GALT2U3KPV4 340 aa11.32□□□□□ -0.6
SCAF1-203ENST00000598359 A0A1W2PQL4 384 aaPredicted RBP11.31□□□□□ -0.6
SCAF1-203ENST00000598359 FAM181BA6NEQ2 426 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 J3QRE1 110 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 MYL12BO14950 172 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 SYNGR1O43759 233 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 DHRS3O75911 302 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 NRASP01111 189 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 PSG2P11465 335 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 NDUFB7P17568 137 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 MDKP21741 143 aaPredicted RBP11.31□□□□□ -0.6
SCAF1-203ENST00000598359 VBP1P61758 197 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 NCS1P62166 190 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 IL13RA1P78552 427 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 DCTN2Q13561 401 aaKnown RBP11.31□□□□□ -0.6
SCAF1-203ENST00000598359 MED22Q15528 200 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 SSX1Q16384 188 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 ZNF684Q5T5D7 378 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 FIP1L1Q6UN15 594 aaKnown RBP11.31□□□□□ -0.6
SCAF1-203ENST00000598359 GDPGP1Q6ZNW5 385 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 KRT74Q7RTS7 529 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 ELMOD2Q8IZ81 293 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 PNKDQ8N490 385 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 Q8N7P7 452 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 YIPF7Q8N8F6 280 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 ZNF485Q8NCK3 441 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 ZNRF1Q8ND25 227 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 OR10H4Q8NGA5 316 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 OR5A2Q8NGI9 324 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 NDNFQ8TB73 568 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 ZNF747Q9BV97 191 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 ACOXLQ9NUZ1 547 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 SLC25A10Q9UBX3 287 aaPredicted RBP11.31□□□□□ -0.6
SCAF1-203ENST00000598359 CLEC2DQ9UHP7 191 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 KPTNQ9Y664 436 aa11.31□□□□□ -0.6
SCAF1-203ENST00000598359 OR5B21A6NL26 309 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 SIGLEC5O15389 551 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 IGHV4-59P01825 116 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 ACAA1P09110 424 aaPredicted RBP11.3□□□□□ -0.6
SCAF1-203ENST00000598359 MYL12AP19105 171 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 CEBPDP49716 269 aaPredicted RBP11.3□□□□□ -0.6
SCAF1-203ENST00000598359 ETV1P50549 477 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 WNT4P56705 351 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 BPIFB3P59826 476 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 EGR3Q06889 387 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 ACSM1Q08AH1 577 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 CLVS2Q5SYC1 327 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 TMEM185AQ8NFB2 350 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 OR14K1Q8NGZ2 314 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 NPRL2Q8WTW4 380 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 MED30Q96HR3 178 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 MNTQ99583 582 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 ZNF649Q9BS31 505 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 PLGRKTQ9HBL7 147 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 NOX4Q9NPH5 578 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 NDUFB11Q9NX14 153 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 CCDC59Q9P031 241 aaKnown RBP11.3□□□□□ -0.6
SCAF1-203ENST00000598359 ZNF222Q9UK12 451 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 MAB21L2Q9Y586 359 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 V9GYS6 101 aa11.3□□□□□ -0.6
SCAF1-203ENST00000598359 A0A1B0GVI7 797 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 A0A1W2PQ09 198 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 RNASEK-C17orf49H0YIS7 233 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 MTRF1O75570 445 aaKnown RBP11.29□□□□□ -0.6
SCAF1-203ENST00000598359 KRT8P05787 483 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 LIMS3P0CW19 117 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 LIMS4P0CW20 117 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 CPEP16870 476 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 HAAOP46952 286 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 SERPINB10P48595 397 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 RELBQ01201 579 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 SRSF4Q08170 494 aaKnown RBP11.29□□□□□ -0.6
SCAF1-203ENST00000598359 TPBGQ13641 420 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 C11orf91Q3C1V1 193 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 ZBTB37Q5TC79 503 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 TMEM42Q69YG0 159 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 ANGPTL5Q86XS5 388 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 CROCCP3Q8IVE0 287 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 OR52N1Q8NH53 320 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 C8orf46Q8TAG6 207 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 ZNF671Q8TAW3 534 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 TRMT10AQ8TBZ6 339 aaKnown RBP11.29□□□□□ -0.6
SCAF1-203ENST00000598359 SLIRPQ9GZT3 109 aaKnown RBP11.29□□□□□ -0.6
SCAF1-203ENST00000598359 NXF2Q9GZY0 626 aaKnown RBP11.29□□□□□ -0.6
SCAF1-203ENST00000598359 DNTTIP1Q9H147 329 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 DCSTAMPQ9H295 470 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 MOB1AQ9H8S9 216 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 PALMDQ9NP74 551 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 INPP5EQ9NRR6 644 aa11.29□□□□□ -0.6
SCAF1-203ENST00000598359 CHCHD3Q9NX63 227 aaKnown RBP11.29□□□□□ -0.6
SCAF1-203ENST00000598359 PQLC2LA1A4F0 135 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms