RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 LAMP3Q9UQV4 416 aa11.27□□□□□ -0.61
DNMT1-228ENST00000592705 POLR2AP24928 1970 aaKnown RBP11.27□□□□□ -0.61
DNMT1-228ENST00000592705 MPZL1O95297 269 aa11.27□□□□□ -0.61
DNMT1-228ENST00000592705 ENDOGQ14249 297 aaKnown RBP11.27□□□□□ -0.61
DNMT1-228ENST00000592705 NTMQ9P121 344 aa11.27□□□□□ -0.61
DNMT1-228ENST00000592705 SKP2Q13309 424 aa11.27□□□□□ -0.61
DNMT1-228ENST00000592705 SURF2Q15527 256 aaPredicted RBP11.27□□□□□ -0.61
DNMT1-228ENST00000592705 LRRC3BQ96PB8 259 aa11.27□□□□□ -0.61
DNMT1-228ENST00000592705 ALKBH3Q96Q83 286 aaPredicted RBP11.27□□□□□ -0.61
DNMT1-228ENST00000592705 PRSS27Q9BQR3 290 aa11.27□□□□□ -0.61
DNMT1-228ENST00000592705 OR51I2Q9H344 312 aa11.27□□□□□ -0.61
DNMT1-228ENST00000592705 MYOZ1Q9NP98 299 aaPredicted RBP11.27□□□□□ -0.61
DNMT1-228ENST00000592705 SIRT4Q9Y6E7 314 aaPredicted RBP11.27□□□□□ -0.61
DNMT1-228ENST00000592705 PGA3P0DJD8 388 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 CD200R1LQ6Q8B3 271 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 GVQW1Q8N7I0 195 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 HPSE2Q8WWQ2 592 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 SMIM7Q9BQ49 75 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 KCNK15Q9H427 330 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 AMDHD2Q9Y303 409 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 POMT1Q9Y6A1 747 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 PDZD11Q5EBL8 140 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 CORO2AQ92828 525 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 SAT2Q96F10 170 aaPredicted RBP11.26□□□□□ -0.61
DNMT1-228ENST00000592705 GPR12P47775 334 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 ETFDHQ16134 617 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 SP6Q3SY56 376 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 SLC25A42Q86VD7 318 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 CHAC2Q8WUX2 184 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 NAA60Q9H7X0 242 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 C20orf202A1L168 122 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 RAC1P63000 192 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 OR6X1Q8NH79 312 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 SHARPINQ9H0F6 387 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 CACFD1Q9UGQ2 172 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 ACACAQ13085 2346 aa11.26□□□□□ -0.61
DNMT1-228ENST00000592705 TO15178 435 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 LTBRP36941 435 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 ACAA2P42765 397 aaKnown RBP11.25□□□□□ -0.61
DNMT1-228ENST00000592705 IL13RA2Q14627 380 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 GGNBP1Q5YKI7 109 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 ZNF705AQ6ZN79 300 aaPredicted RBP11.25□□□□□ -0.61
DNMT1-228ENST00000592705 NUBPLQ8TB37 319 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 CLDN23Q96B33 292 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 TAAR6Q96RI8 345 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 SLC26A1Q9H2B4 701 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 GNB4Q9HAV0 340 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 ATG2BQ96BY7 2078 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 CACNA1EQ15878 2313 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 PRSS53Q2L4Q9 553 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 SEZ6L2Q6UXD5 910 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 MRGPRGQ86SM5 289 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 ADPRHL1Q8NDY3 354 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 OR13D1Q8NGV5 346 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 TMPRSS13Q9BYE2 586 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 WDR90Q96KV7 1748 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 TRAV8-7A0A075B6U6 113 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 EML2O95834 649 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 MGST1P10620 155 aaKnown RBP11.25□□□□□ -0.61
DNMT1-228ENST00000592705 TGIF1Q15583 401 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 NCR3LG1Q68D85 454 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 C6orf201Q7Z4U5 140 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 RPUSD4Q96CM3 377 aaKnown RBP11.25□□□□□ -0.61
DNMT1-228ENST00000592705 LURAP1Q96LR2 239 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 TGIF2Q9GZN2 237 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 BGLAPP02818 100 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 CRHP06850 196 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 CYC1P08574 325 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 ZNF250P15622 560 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 HOXD11P31277 338 aaPredicted RBP11.25□□□□□ -0.61
DNMT1-228ENST00000592705 GPM6AP51674 278 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 SLC37A1P57057 533 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 GHITMQ9H3K2 345 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 RPH3ALQ9UNE2 315 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 SSUH2Q9Y2M2 353 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 PARP14Q460N5 1801 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 MYO16Q9Y6X6 1858 aa11.25□□□□□ -0.61
DNMT1-228ENST00000592705 SP1P08047 785 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 CT45A6P0DMU7 189 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 CT45A5P0DMU8 189 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 CT45A7P0DMV0 189 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 CT45A8P0DMV1 189 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 CT45A9P0DMV2 189 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 SMIM21Q3B7S5 101 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 CT45A2Q5DJT8 189 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 CT45A1Q5HYN5 189 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 ZNF429Q86V71 674 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 OR10D3Q8NH80 312 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 CT45A3Q8NHU0 189 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 PINX1Q96BK5 328 aaKnown RBP11.24□□□□□ -0.61
DNMT1-228ENST00000592705 FAAP24Q9BTP7 215 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 TRIP12Q14669 1992 aaPredicted RBP11.24□□□□□ -0.61
DNMT1-228ENST00000592705 A1L4Q6 167 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 CTSDP07339 412 aaPredicted RBP11.24□□□□□ -0.61
DNMT1-228ENST00000592705 OR2B11Q5JQS5 317 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 C1QL3Q5VWW1 255 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 CCL17Q92583 94 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 ZNF75AQ96N20 296 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 S1PR3Q99500 378 aa11.24□□□□□ -0.61
DNMT1-228ENST00000592705 PECRQ9BY49 303 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms