RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 COL6A3P12111 3177 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 LTBP2Q14767 1821 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 A8MVM7 634 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 H0YIG0 161 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 H3BP45 60 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 B3GALT2O43825 422 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 FOLR1P15328 257 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 HNF1AP20823 631 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 ZNF93P35789 620 aaPredicted RBP13.32□□□□□ -0.28
CIRBP-228ENST00000590347 TMEM31Q5JXX7 168 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 RAB42Q8N4Z0 105 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 ZNF514Q96K75 400 aaPredicted RBP13.32□□□□□ -0.28
CIRBP-228ENST00000590347 OR8D2Q9GZM6 311 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 PARD6AQ9NPB6 346 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 SERGEFQ9UGK8 458 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 B4E171 279 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 UNC13CQ8NB66 2214 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 OR11L1Q8NGX0 322 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 DYRK2Q92630 601 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 GPR34Q9UPC5 381 aa13.32□□□□□ -0.28
CIRBP-228ENST00000590347 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.31□□□□□ -0.28
CIRBP-228ENST00000590347 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.31□□□□□ -0.28
CIRBP-228ENST00000590347 HNRNPA1P09651 372 aaKnown RBP eCLIP13.31□□□□□ -0.28
CIRBP-228ENST00000590347 CXCR1P25024 350 aa13.31□□□□□ -0.28
CIRBP-228ENST00000590347 IQCJQ1A5X6 159 aa13.31□□□□□ -0.28
CIRBP-228ENST00000590347 PRICKLE4Q2TBC4 344 aa13.31□□□□□ -0.28
CIRBP-228ENST00000590347 DEFB110Q30KQ9 67 aa13.31□□□□□ -0.28
CIRBP-228ENST00000590347 HNRNPA1L2Q32P51 320 aaKnown RBP13.31□□□□□ -0.28
CIRBP-228ENST00000590347 C1orf140Q5VVS0 124 aa13.31□□□□□ -0.28
CIRBP-228ENST00000590347 ZNF283Q8N7M2 679 aa13.31□□□□□ -0.28
CIRBP-228ENST00000590347 LRRC75AQ8NAA5 344 aa13.31□□□□□ -0.28
CIRBP-228ENST00000590347 TMEM171Q8WVE6 324 aa13.31□□□□□ -0.28
CIRBP-228ENST00000590347 C22orf15Q8WYQ4 148 aa13.31□□□□□ -0.28
CIRBP-228ENST00000590347 FAM71F1Q96KD3 344 aaPredicted RBP13.31□□□□□ -0.28
CIRBP-228ENST00000590347 CUTCQ9NTM9 273 aa13.31□□□□□ -0.28
CIRBP-228ENST00000590347 ZNF581Q9P0T4 197 aa13.31□□□□□ -0.28
CIRBP-228ENST00000590347 EML2O95834 649 aa13.31□□□□□ -0.28
CIRBP-228ENST00000590347 METTL15P1P0C7V9 234 aa13.31□□□□□ -0.28
CIRBP-228ENST00000590347 HIST1H1DP16402 221 aaKnown RBP13.31□□□□□ -0.28
CIRBP-228ENST00000590347 ACKR1Q16570 336 aa13.31□□□□□ -0.28
CIRBP-228ENST00000590347 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.31□□□□□ -0.28
CIRBP-228ENST00000590347 OR13D1Q8NGV5 346 aa13.31□□□□□ -0.28
CIRBP-228ENST00000590347 DAZLQ92904 295 aaKnown RBP13.31□□□□□ -0.28
CIRBP-228ENST00000590347 LINC00615Q96LM1 132 aaPredicted RBP13.31□□□□□ -0.28
CIRBP-228ENST00000590347 MRPS28Q9Y2Q9 187 aaKnown RBP13.31□□□□□ -0.28
CIRBP-228ENST00000590347 TDRD6O60522 2096 aaKnown RBP13.31□□□□□ -0.28
CIRBP-228ENST00000590347 E5RGE8 158 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 BGLAPP02818 100 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 HLA-DOBP13765 273 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 PIGPP57054 158 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 MRPS34P82930 218 aaKnown RBP13.3□□□□□ -0.28
CIRBP-228ENST00000590347 GAB4Q2WGN9 574 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 SAPCD1Q5SSQ6 148 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 OR1N1Q8NGS0 311 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 OR2J1Q9GZK6 312 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 OSGIN2Q9Y236 505 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 NSG2Q9Y328 171 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 A0A087WWC5 75 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 PRNPP04156 253 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 P2RY2P41231 377 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 PRSS12P56730 875 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 C1orf100Q5SVJ3 147 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 SSX7Q7RTT5 188 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 C1QL2Q7Z5L3 287 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 ZNF573Q86YE8 665 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 OR51T1Q8NGJ9 327 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 OR51E1Q8TCB6 317 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 TMEM59Q9BXS4 323 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 STRAPQ9Y3F4 350 aaKnown RBP13.3□□□□□ -0.28
CIRBP-228ENST00000590347 PLRG1O43660 514 aaKnown RBP13.3□□□□□ -0.28
CIRBP-228ENST00000590347 GCGP01275 180 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 RAB7AP51149 207 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 EWSR1Q01844 656 aaKnown RBP eCLIP13.3□□□□□ -0.28
CIRBP-228ENST00000590347 MMDQ15546 238 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 C16orf82Q7Z2V1 217 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 DTWD2Q8NBA8 298 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 LIME1Q9H400 295 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.3□□□□□ -0.28
CIRBP-228ENST00000590347 NAGKQ9UJ70 344 aa13.3□□□□□ -0.28
CIRBP-228ENST00000590347 KIAA1549LQ6ZVL6 1849 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 A0A1W2PP55 124 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 M0QZ24 198 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 LINC00614P0C842 121 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 PTTG1IPP53801 180 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 QRFPP83859 136 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 SGCGQ13326 291 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 ESPL1Q14674 2120 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 TAF9Q16594 264 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 FBXO42Q6P3S6 717 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 C20orf196Q8IYI0 205 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 MFSD9Q8NBP5 474 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 FGF14Q92915 247 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 RPUSD4Q96CM3 377 aaKnown RBP13.29□□□□□ -0.28
CIRBP-228ENST00000590347 ZNF107Q9UII5 783 aaPredicted RBP13.29□□□□□ -0.28
CIRBP-228ENST00000590347 A0A1W2PNV4 684 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 CDC14CA4D256 554 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 CCL25O15444 150 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 SSSCA1O60232 199 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 IGHEP01854 428 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 CHRM2P08172 466 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms