RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 HLA-DQB1P01920 261 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 TRAPPC2P0DI81 140 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 TRAPPC2BP0DI82 140 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 PAX1P15863 534 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 PMELP40967 661 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 GATA4P43694 442 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 RNASE12Q5GAN4 147 aaKnown RBP9.24□□□□□ -0.93
TOP3A-216ENST00000583804 FAM76BQ5HYJ3 339 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 SLC25A26Q70HW3 274 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 TGIF2LYQ8IUE0 185 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 C11orf53Q8IXP5 236 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 ZNF525Q8N782 197 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 BOLLQ8N9W6 283 aaKnown RBP9.24□□□□□ -0.93
TOP3A-216ENST00000583804 PNLDC1Q8NA58 520 aaKnown RBP9.24□□□□□ -0.93
TOP3A-216ENST00000583804 SCCPDHQ8NBX0 429 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 OR6M1Q8NGM8 313 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 ACOT12Q8WYK0 555 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 YIPF5Q969M3 257 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 ERGIC1Q969X5 290 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 SLC25A28Q96A46 364 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 FAM3DQ96BQ1 224 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 MBD6Q96DN6 1003 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 CPNE2Q96FN4 548 aaPredicted RBP9.24□□□□□ -0.93
TOP3A-216ENST00000583804 CYYR1Q96J86 154 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 SOSTQ9BQB4 213 aa9.24□□□□□ -0.93
TOP3A-216ENST00000583804 TMEM272A0A1B0GTI8 110 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 CRTAPO75718 401 aaPredicted RBP9.23□□□□□ -0.93
TOP3A-216ENST00000583804 RHBDL1O75783 438 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 HTR3BO95264 441 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 PTBP3O95758 552 aaKnown RBP9.23□□□□□ -0.93
TOP3A-216ENST00000583804 MPIG6BO95866 241 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 CYB5R3P00387 301 aaPredicted RBP9.23□□□□□ -0.93
TOP3A-216ENST00000583804 ALDOBP05062 364 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 ARSBP15848 533 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 ELK1P19419 428 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 CD300CQ08708 224 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 C2orf76Q3KRA6 126 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 MZT2AQ6P582 158 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 FAM131AQ6UXB0 335 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 RTN4RL2Q86UN3 420 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 LYPD6Q86Y78 171 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 OR8H2Q8N162 312 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 S100A13Q99584 98 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 DLL4Q9NR61 685 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 TMEM106BQ9NUM4 274 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 DCAF16Q9NXF7 216 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 RNF7Q9UBF6 113 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 ADAM30Q9UKF2 790 aa9.23□□□□□ -0.93
TOP3A-216ENST00000583804 IGKV1-12A0A0C4DH73 117 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 FABP12A6NFH5 140 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 J3QT63 122 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 PPIHO43447 177 aaKnown RBP9.22□□□□□ -0.93
TOP3A-216ENST00000583804 AKR7A2O43488 359 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 ZNF205O95201 554 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 CYB5AP00167 134 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 IGKV1D-12P01611 117 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 BCL3P20749 454 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 PTGFRP43088 359 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 NPBWR2P48146 333 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 RFX2P48378 723 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 PDLIM4P50479 330 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 ZP1P60852 638 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 MRPS11P82912 194 aaKnown RBP9.22□□□□□ -0.93
TOP3A-216ENST00000583804 PDCD1Q15116 288 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 BAK1Q16611 211 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 C1orf100Q5SVJ3 147 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 CNIH2Q6PI25 160 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 CLEC2AQ6UVW9 174 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 WDR82Q6UXN9 313 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 BIVMQ86UB2 503 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 LURAP1LQ8IV03 231 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 LRRC75A-AS1Q8N1F1 130 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 TMEM104Q8NE00 496 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 OR4M1Q8NGD0 313 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 LRRC29Q8WV35 223 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 AQP3Q92482 292 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 FOXRED1Q96CU9 486 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-216ENST00000583804 KCTD12Q96CX2 325 aaKnown RBP9.22□□□□□ -0.93
TOP3A-216ENST00000583804 SLC25A38Q96DW6 304 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 DIRAS2Q96HU8 199 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 PKIBQ9C010 78 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 TLNRD1Q9H1K6 362 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 ATG5Q9H1Y0 275 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 CHODLQ9H9P2 273 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 EXTL2Q9UBQ6 330 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 POLDIP2Q9Y2S7 368 aa9.22□□□□□ -0.93
TOP3A-216ENST00000583804 ANKRD17O75179 2603 aaKnown RBP9.22□□□□□ -0.93
TOP3A-216ENST00000583804 A0A1W2PQ09 198 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 F8VVB4 439 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 F8VWA3 439 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 TMEM178BH3BS89 294 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 IFNL4K9M1U5 179 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 RP2O75695 350 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 KDM4BO94953 1096 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 TFF1P04155 84 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 CSF3P09919 207 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 VSIG8P0DPA2 414 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 ART1P52961 327 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 TMEM33P57088 247 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 PDZK1IP1Q13113 114 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms