RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 MKXQ8IYA7 352 aa20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 Q8IYB0 196 aa20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 TSEN15Q8WW01 171 aaKnown RBP20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 LHX4Q969G2 390 aa20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 SLAMF9Q96A28 289 aa20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 TMEM80Q96HE8 168 aa20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 ZNF48Q96MX3 618 aaPredicted RBP20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 OPALINQ96PE5 141 aa20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 MTCH1Q9NZJ7 389 aa20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 DHDHQ9UQ10 334 aa20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 DOCK11Q5JSL3 2073 aa20.46■□□□□ 0.87
CDC42EP4-205ENST00000580315 IGKV1-9A0A0C4DH69 117 aa20.45■□□□□ 0.86
CDC42EP4-205ENST00000580315 CENPVL3A0A0U1RRI6 287 aa20.45■□□□□ 0.86
CDC42EP4-205ENST00000580315 DNAJC9-AS1A6NH13 148 aa20.45■□□□□ 0.86
CDC42EP4-205ENST00000580315 RPL22L1Q6P5R6 122 aaKnown RBP20.45■□□□□ 0.86
CDC42EP4-205ENST00000580315 VMO1Q7Z5L0 202 aa20.45■□□□□ 0.86
CDC42EP4-205ENST00000580315 OR13C9Q8NGT0 318 aa20.45■□□□□ 0.86
CDC42EP4-205ENST00000580315 C1orf147Q96MC9 270 aaPredicted RBP20.45■□□□□ 0.86
CDC42EP4-205ENST00000580315 PDCD1LG2Q9BQ51 273 aa20.45■□□□□ 0.86
CDC42EP4-205ENST00000580315 TGP01266 2768 aa20.44■□□□□ 0.86
CDC42EP4-205ENST00000580315 ERICH4A6NGS2 130 aa20.44■□□□□ 0.86
CDC42EP4-205ENST00000580315 INMTO95050 263 aa20.44■□□□□ 0.86
CDC42EP4-205ENST00000580315 MT-ND2P03891 347 aa20.44■□□□□ 0.86
CDC42EP4-205ENST00000580315 POU3F4P49335 361 aa20.44■□□□□ 0.86
CDC42EP4-205ENST00000580315 BLMHQ13867 455 aa20.44■□□□□ 0.86
CDC42EP4-205ENST00000580315 FIP1L1Q6UN15 594 aaKnown RBP20.44■□□□□ 0.86
CDC42EP4-205ENST00000580315 SERPINA12Q8IW75 414 aa20.44■□□□□ 0.86
CDC42EP4-205ENST00000580315 OR5D14Q8NGL3 314 aa20.44■□□□□ 0.86
CDC42EP4-205ENST00000580315 ZDHHC16Q969W1 377 aa20.44■□□□□ 0.86
CDC42EP4-205ENST00000580315 ZCCHC4Q9H5U6 513 aa20.44■□□□□ 0.86
CDC42EP4-205ENST00000580315 IGHV1-69DA0A0B4J2H0 117 aa20.43■□□□□ 0.86
CDC42EP4-205ENST00000580315 EFCAB10A6NFE3 127 aa20.43■□□□□ 0.86
CDC42EP4-205ENST00000580315 M0R1W7 72 aa20.43■□□□□ 0.86
CDC42EP4-205ENST00000580315 IGHV1-69P01742 117 aa20.43■□□□□ 0.86
CDC42EP4-205ENST00000580315 GNAO1P09471 354 aa20.43■□□□□ 0.86
CDC42EP4-205ENST00000580315 CEBPDP49716 269 aaPredicted RBP20.43■□□□□ 0.86
CDC42EP4-205ENST00000580315 GTF2A1P52655 376 aaPredicted RBP20.43■□□□□ 0.86
CDC42EP4-205ENST00000580315 RUSC1-AS1Q66K80 236 aa20.43■□□□□ 0.86
CDC42EP4-205ENST00000580315 C1orf122Q6ZSJ8 110 aa20.43■□□□□ 0.86
CDC42EP4-205ENST00000580315 FAM185AQ8N0U4 392 aa20.43■□□□□ 0.86
CDC42EP4-205ENST00000580315 EMG1Q92979 244 aaKnown RBP20.43■□□□□ 0.86
CDC42EP4-205ENST00000580315 ELL3Q9HB65 397 aaPredicted RBP20.43■□□□□ 0.86
CDC42EP4-205ENST00000580315 NKX1-2Q9UD57 310 aaPredicted RBP20.43■□□□□ 0.86
CDC42EP4-205ENST00000580315 SOX21Q9Y651 276 aaPredicted RBP20.43■□□□□ 0.86
CDC42EP4-205ENST00000580315 A0A1W2PPH5 198 aa20.42■□□□□ 0.86
CDC42EP4-205ENST00000580315 CHRM2P08172 466 aa20.42■□□□□ 0.86
CDC42EP4-205ENST00000580315 PIPP12273 146 aaPredicted RBP20.42■□□□□ 0.86
CDC42EP4-205ENST00000580315 DEFB112Q30KQ8 113 aa20.42■□□□□ 0.86
CDC42EP4-205ENST00000580315 OR2G6Q5TZ20 316 aa20.42■□□□□ 0.86
CDC42EP4-205ENST00000580315 GGHQ92820 318 aa20.42■□□□□ 0.86
CDC42EP4-205ENST00000580315 FAM234AQ9H0X4 552 aa20.42■□□□□ 0.86
CDC42EP4-205ENST00000580315 BABAM2Q9NXR7 383 aa20.42■□□□□ 0.86
CDC42EP4-205ENST00000580315 CNOT2Q9NZN8 540 aaKnown RBP20.42■□□□□ 0.86
CDC42EP4-205ENST00000580315 GUCA2AQ02747 115 aa20.41■□□□□ 0.86
CDC42EP4-205ENST00000580315 ST3GAL4Q11206 333 aa20.41■□□□□ 0.86
CDC42EP4-205ENST00000580315 PDZK1IP1Q13113 114 aa20.41■□□□□ 0.86
CDC42EP4-205ENST00000580315 CDK5R1Q15078 307 aa20.41■□□□□ 0.86
CDC42EP4-205ENST00000580315 PARP16Q8N5Y8 322 aa20.41■□□□□ 0.86
CDC42EP4-205ENST00000580315 OR52N1Q8NH53 320 aa20.41■□□□□ 0.86
CDC42EP4-205ENST00000580315 TBC1D15Q8TC07 691 aa20.41■□□□□ 0.86
CDC42EP4-205ENST00000580315 GPR148Q8TDV2 347 aa20.41■□□□□ 0.86
CDC42EP4-205ENST00000580315 TFAP2CQ92754 450 aa20.41■□□□□ 0.86
CDC42EP4-205ENST00000580315 SLC25A28Q96A46 364 aa20.41■□□□□ 0.86
CDC42EP4-205ENST00000580315 METTL8Q9H825 291 aaKnown RBP20.41■□□□□ 0.86
CDC42EP4-205ENST00000580315 UNKLQ9H9P5 680 aaKnown RBP20.41■□□□□ 0.86
CDC42EP4-205ENST00000580315 NOX4Q9NPH5 578 aa20.41■□□□□ 0.86
CDC42EP4-205ENST00000580315 SIRT7Q9NRC8 400 aa20.41■□□□□ 0.86
CDC42EP4-205ENST00000580315 F8VVB4 439 aa20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 F8VWA3 439 aa20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 CLDN34H7C241 214 aa20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 SULT1B1O43704 296 aa20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 ALX3O95076 343 aa20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 TK1P04183 234 aa20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 CD2P06729 351 aa20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 HCKP08631 526 aa20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 RPL31P62899 125 aaKnown RBP20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 COL10A1Q03692 680 aa20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 METAP1DQ6UB28 335 aaPredicted RBP20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 PDZD9Q8IXQ8 264 aa20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 FAM58AQ8N1B3 248 aa20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 ASCC1Q8N9N2 400 aaKnown RBP20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 PRDM13Q9H4Q3 707 aa20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 PLCXD1Q9NUJ7 323 aa20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 CLEC2DQ9UHP7 191 aa20.4■□□□□ 0.86
CDC42EP4-205ENST00000580315 MDFIC2A0A1B0GVS7 189 aa20.39■□□□□ 0.85
CDC42EP4-205ENST00000580315 H0YJX3 145 aa20.39■□□□□ 0.85
CDC42EP4-205ENST00000580315 RNASE1P07998 156 aaKnown RBP20.39■□□□□ 0.85
CDC42EP4-205ENST00000580315 BCL3P20749 454 aa20.39■□□□□ 0.85
CDC42EP4-205ENST00000580315 EEF1B2P24534 225 aaKnown RBP20.39■□□□□ 0.85
CDC42EP4-205ENST00000580315 NCR3LG1Q68D85 454 aa20.39■□□□□ 0.85
CDC42EP4-205ENST00000580315 XAF1Q6GPH4 301 aa20.39■□□□□ 0.85
CDC42EP4-205ENST00000580315 STX19Q8N4C7 294 aa20.39■□□□□ 0.85
CDC42EP4-205ENST00000580315 Q8N7P7 452 aa20.39■□□□□ 0.85
CDC42EP4-205ENST00000580315 BPIFB6Q8NFQ5 453 aa20.39■□□□□ 0.85
CDC42EP4-205ENST00000580315 FBLIM1Q8WUP2 373 aa20.39■□□□□ 0.85
CDC42EP4-205ENST00000580315 RFT1Q96AA3 541 aa20.39■□□□□ 0.85
CDC42EP4-205ENST00000580315 CPNE2Q96FN4 548 aaPredicted RBP20.39■□□□□ 0.85
CDC42EP4-205ENST00000580315 C19orf12Q9NSK7 152 aa20.39■□□□□ 0.85
CDC42EP4-205ENST00000580315 GLS2Q9UI32 602 aa20.39■□□□□ 0.85
CDC42EP4-205ENST00000580315 PSORS1C1Q9UIG5 152 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms