RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 Q8IYB0 196 aa9.18□□□□□ -0.94
PTPRM-205ENST00000577827 OR8U1Q8NH10 309 aa9.18□□□□□ -0.94
PTPRM-205ENST00000577827 MRPL24Q96A35 216 aaKnown RBP9.18□□□□□ -0.94
PTPRM-205ENST00000577827 CLDN23Q96B33 292 aa9.18□□□□□ -0.94
PTPRM-205ENST00000577827 ATP5SQ99766 215 aa9.18□□□□□ -0.94
PTPRM-205ENST00000577827 CHRDL1Q9BU40 450 aa9.18□□□□□ -0.94
PTPRM-205ENST00000577827 TLNRD1Q9H1K6 362 aa9.18□□□□□ -0.94
PTPRM-205ENST00000577827 LIPGQ9Y5X9 500 aa9.18□□□□□ -0.94
PTPRM-205ENST00000577827 OTOL1A6NHN0 477 aaPredicted RBP9.18□□□□□ -0.94
PTPRM-205ENST00000577827 LIPT2A6NK58 231 aa9.18□□□□□ -0.94
PTPRM-205ENST00000577827 MGST1P10620 155 aaKnown RBP9.18□□□□□ -0.94
PTPRM-205ENST00000577827 NPBWR1P48145 328 aa9.18□□□□□ -0.94
PTPRM-205ENST00000577827 C1orf53Q5VUE5 145 aa9.18□□□□□ -0.94
PTPRM-205ENST00000577827 SLC36A1Q7Z2H8 476 aa9.18□□□□□ -0.94
PTPRM-205ENST00000577827 EDARADDQ8WWZ3 215 aa9.18□□□□□ -0.94
PTPRM-205ENST00000577827 TMEM37Q8WXS4 190 aa9.18□□□□□ -0.94
PTPRM-205ENST00000577827 LYRM2Q9NU23 88 aaPredicted RBP9.18□□□□□ -0.94
PTPRM-205ENST00000577827 A0A1W2PPE2 198 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 H3BQ15 152 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 LINC01387J3KSC0 135 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 NRG2O14511 850 aaPredicted RBP9.17□□□□□ -0.94
PTPRM-205ENST00000577827 DXOO77932 396 aaKnown RBP9.17□□□□□ -0.94
PTPRM-205ENST00000577827 NGFRP08138 427 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 DAOP14920 347 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 DLK1P80370 383 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 ZP4Q12836 540 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 KHDC3LQ587J8 217 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 KDF1Q8NAX2 398 aaPredicted RBP9.17□□□□□ -0.94
PTPRM-205ENST00000577827 TMEM104Q8NE00 496 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 GPR87Q9BY21 358 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 SLC35D1Q9NTN3 355 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 RCC2Q9P258 522 aaKnown RBP9.17□□□□□ -0.94
PTPRM-205ENST00000577827 STARD10Q9Y365 291 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 TRAPPC1Q9Y5R8 145 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 C5orf49A4QMS7 147 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 SOX15O60248 233 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 MYOGP15173 224 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 FOXO1Q12778 655 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 CEACAM16Q2WEN9 425 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 BSXQ3C1V8 233 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 C20orf196Q8IYI0 205 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 TMEM52Q8NDY8 209 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 OR10A7Q8NGE5 316 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 ADAMTS17Q8TE56 1095 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 AQP3Q92482 292 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 KCNK7Q9Y2U2 307 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 MTCH2Q9Y6C9 303 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 LTBP1Q14766 1721 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 IGHV5-51A0A0C4DH38 117 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 UBE2L5PA0A1B0GUS4 154 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 GPR37O15354 613 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 MPPED1O15442 326 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 MOSPD3O75425 235 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 EWSR1Q01844 656 aaKnown RBP eCLIP9.17□□□□□ -0.94
PTPRM-205ENST00000577827 SLC38A11Q08AI6 406 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 UBE2V2Q15819 145 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 LTC4SQ16873 150 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 BATF2Q8N1L9 274 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 C8orf44Q96CB5 159 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 PACRGQ96M98 296 aaPredicted RBP9.17□□□□□ -0.94
PTPRM-205ENST00000577827 ADAT1Q9BUB4 502 aaKnown RBP9.17□□□□□ -0.94
PTPRM-205ENST00000577827 VAMP8Q9BV40 100 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 SLC2A9Q9NRM0 540 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 CARHSP1Q9Y2V2 147 aaKnown RBP9.17□□□□□ -0.94
PTPRM-205ENST00000577827 KLRC4-KLRK1H3BQV0 150 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 ZNF737O75373 536 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 BTCP35070 178 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 POLR2GP62487 172 aaKnown RBP eCLIP9.17□□□□□ -0.94
PTPRM-205ENST00000577827 DMRTC1Q5HYR2 192 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 C9orf152Q5JTZ5 239 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 RBMXL3Q8N7X1 1067 aaKnown RBP9.17□□□□□ -0.94
PTPRM-205ENST00000577827 ZNF321PQ8N8H1 164 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 OR11L1Q8NGX0 322 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 OR2V1Q8NHB1 315 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 ANAPC16Q96DE5 110 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 TAAR9Q96RI9 348 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 PIPOXQ9P0Z9 390 aa9.17□□□□□ -0.94
PTPRM-205ENST00000577827 IGKV1D-16P01601 117 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 S100A7P31151 101 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 ASCL1P50553 236 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 GNG3P63215 75 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 INSM1Q01101 510 aaPredicted RBP9.16□□□□□ -0.94
PTPRM-205ENST00000577827 PMP22Q01453 160 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 OR8G1Q15617 311 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 LINC01590Q5TEZ4 76 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.16□□□□□ -0.94
PTPRM-205ENST00000577827 ADAT3Q96EY9 351 aaPredicted RBP9.16□□□□□ -0.94
PTPRM-205ENST00000577827 VAX2Q9UIW0 290 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 METTL12A8MUP2 240 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 M0R143 59 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 TTRP02766 147 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 SLC25A6P12236 298 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 TEX30Q5JUR7 227 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 TMEM211Q6ICI0 200 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 TMPRSS7Q7RTY8 843 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 TIPARPQ7Z3E1 657 aaKnown RBP9.16□□□□□ -0.94
PTPRM-205ENST00000577827 CNEP1R1Q8N9A8 125 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 RHBDD1Q8TEB9 315 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 MANBALQ9NQG1 85 aa9.16□□□□□ -0.94
PTPRM-205ENST00000577827 KCNMB2Q9Y691 235 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms