RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 BTNL8Q6UX41 500 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 DYRK2Q92630 601 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 WNT2BQ93097 391 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 GALNT14Q96FL9 552 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 TLNRD1Q9H1K6 362 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 TMEM231Q9H6L2 316 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 RHOFQ9HBH0 211 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 FBXL17Q9UF56 701 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 KCNIP3Q9Y2W7 256 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 CCDC85CA6NKD9 419 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 CYTIPO60759 359 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 CER1O95813 267 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 MUC1P15941 1255 aaPredicted RBP7.75□□□□□ -1.17
NCBP3-204ENST00000574911 RPS18P62269 152 aaKnown RBP7.75□□□□□ -1.17
NCBP3-204ENST00000574911 OR8B8Q15620 311 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 WIPI1Q5MNZ9 446 aaPredicted RBP7.75□□□□□ -1.17
NCBP3-204ENST00000574911 SKA3Q8IX90 412 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 LRTM2Q8N967 370 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 SLC39A7Q92504 469 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 ADAT1Q9BUB4 502 aaKnown RBP7.75□□□□□ -1.17
NCBP3-204ENST00000574911 HRH4Q9H3N8 390 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 NDRG3Q9UGV2 375 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 SLC7A11Q9UPY5 501 aa7.75□□□□□ -1.17
NCBP3-204ENST00000574911 MED6O75586 246 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 JTBO76095 146 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 MMP7P09237 267 aaPredicted RBP7.74□□□□□ -1.17
NCBP3-204ENST00000574911 OR5AC1P0C628 307 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 NME2P22392 152 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 OTX2P32243 289 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 PMELP40967 661 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 FLI1Q01543 452 aaPredicted RBP7.74□□□□□ -1.17
NCBP3-204ENST00000574911 TRIM61Q5EBN2 209 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 BRICD5Q6PL45 260 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 SLC22A25Q6T423 547 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 FBXL14Q8N1E6 418 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 TOMM40LQ969M1 308 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 SPSB4Q96A44 273 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 POM121Q96HA1 1249 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 C18orf12Q96KH6 178 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 NRIP2Q9BQI9 281 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 PLEKHA2Q9HB19 425 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 PARP11Q9NR21 331 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 DEPPQ9NTK1 212 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 RCC2Q9P258 522 aaKnown RBP7.74□□□□□ -1.17
NCBP3-204ENST00000574911 TCFL5Q9UL49 500 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 LSM5Q9Y4Y9 91 aaKnown RBP7.74□□□□□ -1.17
NCBP3-204ENST00000574911 MED12Q93074 2177 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 WDFY3Q8IZQ1 3526 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 SDK1Q7Z5N4 2213 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 ZNF816-ZNF321PA0A0X1KG74 233 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 PINLYPA6NC86 204 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 H7C1Q1 480 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 NDUFA2O43678 99 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 PDCD6O75340 191 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 MBPP02686 304 aaPredicted RBP7.74□□□□□ -1.17
NCBP3-204ENST00000574911 EDN3P14138 238 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 IL32P24001 234 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 UCP3P55916 312 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 TMEM33P57088 247 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 HFEQ30201 348 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 SP6Q3SY56 376 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 TMEM88Q6PEY1 159 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 HAGHLQ6PII5 290 aaPredicted RBP7.74□□□□□ -1.17
NCBP3-204ENST00000574911 Q6ZPA2 131 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 SPAG16Q8N0X2 631 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 ESX1Q8N693 406 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 RTN4IP1Q8WWV3 396 aaPredicted RBP7.74□□□□□ -1.17
NCBP3-204ENST00000574911 TMEM45BQ96B21 275 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 TECTBQ96PL2 329 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 SUCNR1Q9BXA5 334 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 C1QTNF5Q9BXJ0 243 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 ARV1Q9H2C2 271 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 ZNF286AQ9HBT8 521 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 ST3GAL6Q9Y274 331 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 FAM96BQ9Y3D0 163 aa7.74□□□□□ -1.17
NCBP3-204ENST00000574911 E5RGE8 158 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 RNASEK-C17orf49H0YIS7 233 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 TRAPPC6AO75865 159 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 ZNF205O95201 554 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 SNAPINO95295 136 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 F12P00748 615 aaPredicted RBP7.73□□□□□ -1.17
NCBP3-204ENST00000574911 CD5P06127 495 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 NPBWR1P48145 328 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 GFRA1P56159 465 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 DAZAP2Q15038 168 aaPredicted RBP7.73□□□□□ -1.17
NCBP3-204ENST00000574911 ABCA11PQ4W5N1 156 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 ACER2Q5QJU3 275 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 PLCXD3Q63HM9 321 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 TMEM211Q6ICI0 200 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 LIAT1Q6ZQX7 453 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.73□□□□□ -1.17
NCBP3-204ENST00000574911 PIGCQ92535 297 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 MOB3AQ96BX8 217 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 ZNF845Q96IR2 970 aaPredicted RBP7.73□□□□□ -1.17
NCBP3-204ENST00000574911 NSG2Q9Y328 171 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 PI4KAP42356 2102 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 FAM221AA4D161 298 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 ZNF587BE7ETH6 402 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 XRCC2O43543 280 aa7.73□□□□□ -1.17
NCBP3-204ENST00000574911 SCGB1D2O95969 90 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms