RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 PDCD1Q15116 288 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 CCDC58Q4VC31 144 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 PDZD9Q8IXQ8 264 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 MKXQ8IYA7 352 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 FAM185AQ8N0U4 392 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 STX19Q8N4C7 294 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 ASCC1Q8N9N2 400 aaKnown RBP13.3□□□□□ -0.28
COMMD4-206ENST00000562610 OR5D18Q8NGL1 313 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 C8orf46Q8TAG6 207 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 FBLIM1Q8WUP2 373 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 GATAD2BQ8WXI9 593 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 ESM1Q9NQ30 184 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 SIRT7Q9NRC8 400 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 CNOT2Q9NZN8 540 aaKnown RBP13.3□□□□□ -0.28
COMMD4-206ENST00000562610 SOX21Q9Y651 276 aaPredicted RBP13.3□□□□□ -0.28
COMMD4-206ENST00000562610 MDFIC2A0A1B0GVS7 189 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 MYL12BO14950 172 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 SULT1B1O43704 296 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 CD2P06729 351 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 BCL3P20749 454 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 SNU13P55769 128 aaKnown RBP13.29□□□□□ -0.28
COMMD4-206ENST00000562610 LAIR2Q6ISS4 152 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 FIP1L1Q6UN15 594 aaKnown RBP13.29□□□□□ -0.28
COMMD4-206ENST00000562610 C9orf139Q6ZV77 190 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 SERPINA12Q8IW75 414 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 Q8IYB0 196 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 KIR3DL3Q8N743 410 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 OR5D14Q8NGL3 314 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 OR52N1Q8NH53 320 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 ZFAND2BQ8WV99 257 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 RGP1Q92546 391 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-206ENST00000562610 SMIM19Q96E16 107 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 ZNF48Q96MX3 618 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-206ENST00000562610 DUX5Q96PT3 197 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 VCX3BQ9H321 246 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 RBFOX1Q9NWB1 397 aaKnown RBP13.29□□□□□ -0.28
COMMD4-206ENST00000562610 PSORS1C1Q9UIG5 152 aa13.29□□□□□ -0.28
COMMD4-206ENST00000562610 TRBV23-1A0A0A0MS06 115 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 CENPVL3A0A0U1RRI6 287 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 DNAJC9-AS1A6NH13 148 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 ANGPTL7O43827 346 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 LALBAP00709 142 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 PRKACAP17612 351 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 COL10A1Q03692 680 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 PRB3Q04118 309 aaPredicted RBP13.28□□□□□ -0.28
COMMD4-206ENST00000562610 BAMBIQ13145 260 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 PARP16Q8N5Y8 322 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 ZFP41Q8N8Y5 198 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 ZDHHC22Q8N966 263 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 RPS4Y2Q8TD47 263 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 GPR148Q8TDV2 347 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 C19orf12Q9NSK7 152 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 PLCXD1Q9NUJ7 323 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 BABAM2Q9NXR7 383 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 IL36RNQ9UBH0 155 aa13.28□□□□□ -0.28
COMMD4-206ENST00000562610 IGHV1-69DA0A0B4J2H0 117 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 PNMA8CA0A1B0GUJ8 204 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 H0YJX3 145 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 IGHV1-69P01742 117 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 MT-ND2P03891 347 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 CALCBP10092 127 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 RAB3AP20336 220 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 NPBWR2P48146 333 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 BPIFB3P59826 476 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 UBA52P62987 128 aaKnown RBP13.27□□□□□ -0.29
COMMD4-206ENST00000562610 PDZK1IP1Q13113 114 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 BLMHQ13867 455 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 RNF144BQ7Z419 303 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 FAM58AQ8N1B3 248 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 OR13C5Q8NGS8 318 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 ZDHHC16Q969W1 377 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 TMEM106AQ96A25 262 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 DMRTB1Q96MA1 342 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 TAS2R4Q9NYW5 299 aa13.27□□□□□ -0.29
COMMD4-206ENST00000562610 SIRT4Q9Y6E7 314 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-206ENST00000562610 M0R1W7 72 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 MAGEB3O15480 346 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 HAND1O96004 215 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 TK1P04183 234 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 CHRM2P08172 466 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 C21orf33P30042 268 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-206ENST00000562610 DLX1P56177 255 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 RPL31P62899 125 aaKnown RBP13.26□□□□□ -0.29
COMMD4-206ENST00000562610 KLRD1Q13241 179 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 KISS1Q15726 138 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 DEFB112Q30KQ8 113 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 IZUMO2Q6UXV1 221 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 Q8N7P7 452 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 OR4M1Q8NGD0 313 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 FAM216AQ8WUB2 273 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 CPNE2Q96FN4 548 aaPredicted RBP13.26□□□□□ -0.29
COMMD4-206ENST00000562610 DNHD1Q96M86 4753 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 GPER1Q99527 375 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 FAM234AQ9H0X4 552 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 ZNF281Q9Y2X9 895 aa13.26□□□□□ -0.29
COMMD4-206ENST00000562610 IGKV1-12A0A0C4DH73 117 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 A0A1W2PPH5 198 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 OGG1O15527 345 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 IGKV1D-12P01611 117 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 TMEM225BP0DP42 221 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms