RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 METTL9Q9H1A3 318 aa10.07□□□□□ -0.8
PCAT1-202ENST00000561978 ELL3Q9HB65 397 aaPredicted RBP10.07□□□□□ -0.8
PCAT1-202ENST00000561978 PCDHB16Q9NRJ7 776 aa10.07□□□□□ -0.8
PCAT1-202ENST00000561978 VSIG4Q9Y279 399 aa10.07□□□□□ -0.8
PCAT1-202ENST00000561978 ZNF175Q9Y473 711 aa10.07□□□□□ -0.8
PCAT1-202ENST00000561978 DMRT1Q9Y5R6 373 aa10.07□□□□□ -0.8
PCAT1-202ENST00000561978 ZNHIT1O43257 154 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 CNOT4O95628 575 aaKnown RBP10.06□□□□□ -0.8
PCAT1-202ENST00000561978 ACTL6AO96019 429 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 HLA-AP01891 365 aaKnown RBP10.06□□□□□ -0.8
PCAT1-202ENST00000561978 PMP2P02689 132 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 HLA-GP17693 338 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 SERPINA2P20848 420 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 MAGEA5P43359 124 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 RBP2P50120 134 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 TAS2R46P59540 309 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 TSPO2Q5TGU0 170 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 OR8H3Q8N146 312 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 ZFP62Q8NB50 900 aaPredicted RBP10.06□□□□□ -0.8
PCAT1-202ENST00000561978 OR5D18Q8NGL1 313 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 NPRL2Q8WTW4 380 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 PIGTQ969N2 578 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 ELMOD3Q96FG2 381 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 PHB2Q99623 299 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 PRDM14Q9GZV8 571 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 BCO1Q9HAY6 547 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 ACKR4Q9NPB9 350 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 SLC7A11Q9UPY5 501 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 NOP16Q9Y3C1 178 aaKnown RBP10.06□□□□□ -0.8
PCAT1-202ENST00000561978 MYO7BQ6PIF6 2116 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 FOXI3A8MTJ6 420 aaPredicted RBP10.06□□□□□ -0.8
PCAT1-202ENST00000561978 ZNF587BE7ETH6 402 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 SIX6O95475 246 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 IL2RAP01589 272 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 CSTBP04080 98 aaKnown RBP10.06□□□□□ -0.8
PCAT1-202ENST00000561978 MMP7P09237 267 aaPredicted RBP10.06□□□□□ -0.8
PCAT1-202ENST00000561978 TMEM225BP0DP42 221 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 ZBTB25P24278 435 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 AGTR1P30556 359 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 S100A11P31949 105 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 OR3A3P47888 321 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 OR3A2P47893 321 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 FUT6P51993 359 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 IL13RA1P78552 427 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 SRSF4Q08170 494 aaKnown RBP10.06□□□□□ -0.8
PCAT1-202ENST00000561978 SLC10A1Q14973 349 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 TSC22D1Q15714 1073 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 C2orf68Q2NKX9 166 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 SFRP5Q5T4F7 317 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 TMEM42Q69YG0 159 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 CRIP3Q6Q6R5 217 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 C1QL2Q7Z5L3 287 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 HOGA1Q86XE5 327 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 OR5H2Q8NGV7 314 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 BORCS8Q96FH0 119 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 PECRQ9BY49 303 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 GPR173Q9NS66 373 aa10.06□□□□□ -0.8
PCAT1-202ENST00000561978 SPTBN1Q01082 2364 aaKnown RBP10.05□□□□□ -0.8
PCAT1-202ENST00000561978 A0A1W2PP11 408 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 C9orf170A2RU37 121 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 TUBAL3A6NHL2 446 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 RFPL4AA6NLU0 287 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 RFPL4AL1F8VTS6 287 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 NRASP01111 189 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 CRYABP02511 175 aaKnown RBP10.05□□□□□ -0.8
PCAT1-202ENST00000561978 CELA3AP09093 270 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 COX5BP10606 129 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 CXCL2P19875 107 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 AMY2BP19961 511 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 ACKR3P25106 362 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 ATP1B3P54709 279 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 PPIAP62937 165 aaKnown RBP10.05□□□□□ -0.8
PCAT1-202ENST00000561978 RSU1Q15404 277 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 MICBQ29980 383 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 PLXDC2Q6UX71 529 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.05□□□□□ -0.8
PCAT1-202ENST00000561978 MCEMP1Q8IX19 187 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 OR5M8Q8NGP6 311 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 OR2AE1Q8NHA4 323 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 MITD1Q8WV92 249 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 ST8SIA4Q92187 359 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 FBXW5Q969U6 566 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 MRPS24Q96EL2 167 aaKnown RBP10.05□□□□□ -0.8
PCAT1-202ENST00000561978 C1QTNF5Q9BXJ0 243 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 SLC6A15Q9H2J7 730 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 NUP50Q9UKX7 468 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 SPTAN1Q13813 2472 aaKnown RBP10.05□□□□□ -0.8
PCAT1-202ENST00000561978 LINC00862A6NCI5 91 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 CEACAM18A8MTB9 384 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 MPC2O95563 127 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 CD8AP01732 235 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 PATE4P0C8F1 98 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 ARF1P84077 181 aaKnown RBP10.05□□□□□ -0.8
PCAT1-202ENST00000561978 FAM3AP98173 230 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 EXOSC2Q13868 293 aaKnown RBP10.05□□□□□ -0.8
PCAT1-202ENST00000561978 PABPC1L2AQ5JQF8 200 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 ZNF324BQ6AW86 544 aaPredicted RBP10.05□□□□□ -0.8
PCAT1-202ENST00000561978 ASCL4Q6XD76 172 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 TUSC5Q8IXB3 177 aa10.05□□□□□ -0.8
PCAT1-202ENST00000561978 SPSB4Q96A44 273 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms