RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 ZIC1Q15915 447 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 PRICKLE4Q2TBC4 344 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 CHRFAM7AQ494W8 412 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 LRRC37A5PQ49AS3 106 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 TMEM35AQ53FP2 167 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 TMEM128Q5BJH2 165 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 PAPPA-AS1Q5QFB9 102 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 SDHAF4Q5VUM1 108 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 FBXW9Q5XUX1 488 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 TPGS2Q68CL5 300 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 RPL7L1Q6DKI1 246 aaKnown RBP2.78□□□□□ -1.96
HERC1-203ENST00000558532 OR4C11Q6IEV9 310 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 SLC48A1Q6P1K1 146 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 C22orf39Q6P5X5 142 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 SPSB3Q6PJ21 355 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 FBXW12Q6X9E4 464 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 DPY19L2P2Q6ZN68 376 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 RFLNAQ6ZTI6 216 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 LANCL3Q6ZV70 420 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 OLIG3Q7RTU3 272 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 SLC16A9Q7RTY1 509 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 FAM220AQ7Z4H9 259 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 SLC35E3Q7Z769 313 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 TMED4Q7Z7H5 227 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 CDC20BQ86Y33 519 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 ZNF573Q86YE8 665 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 ZNF101Q8IZC7 436 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 ZNF619Q8N2I2 560 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 ZNF433Q8N7K0 673 aaPredicted RBP2.78□□□□□ -1.96
HERC1-203ENST00000558532 FRMD1Q8N878 549 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 NKAIN3Q8N8D7 197 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 LMNTD1Q8N9Z9 388 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 AVL9Q8NBF6 648 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 NPEPL1Q8NDH3 523 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 ZNF740Q8NDX6 193 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 NOXO1Q8NFA2 376 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 OR51D1Q8NGF3 324 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 OR5T3Q8NGG3 340 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 OR9A2Q8NGT5 310 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 OR2A12Q8NGT7 310 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 PFN4Q8NHR9 129 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 ZNF563Q8TA94 476 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 WFDC5Q8TCV5 224 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 SKA2Q8WVK7 121 aaPredicted RBP2.78□□□□□ -1.96
HERC1-203ENST00000558532 METTL21AQ8WXB1 218 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 GLYATL1Q969I3 302 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 TMEM106AQ96A25 262 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 TMEM230Q96A57 120 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 FAM3DQ96BQ1 224 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 BPIFA2Q96DR5 249 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 MS4A6EQ96DS6 147 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 ZMYND19Q96E35 227 aaPredicted RBP2.78□□□□□ -1.96
HERC1-203ENST00000558532 CNRIP1Q96F85 164 aaPredicted RBP2.78□□□□□ -1.96
HERC1-203ENST00000558532 CPNE2Q96FN4 548 aaPredicted RBP2.78□□□□□ -1.96
HERC1-203ENST00000558532 SEC22AQ96IW7 307 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 C4orf45Q96LM5 186 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 C2orf50Q96LR7 162 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 AIF1LQ9BQI0 150 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 TMEM208Q9BTX3 173 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 PBDC1Q9BVG4 233 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 NUDT9Q9BW91 350 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 ANGPTL4Q9BY76 406 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 SPRY4Q9C004 299 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 OR8D2Q9GZM6 311 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 AICDAQ9GZX7 198 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 PCBD2Q9H0N5 130 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 SLC26A1Q9H2B4 701 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 MTHFD2LQ9H903 347 aaPredicted RBP2.78□□□□□ -1.96
HERC1-203ENST00000558532 SPACA1Q9HBV2 294 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 CHST11Q9NPF2 352 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 FAM212BQ9NTI7 297 aaPredicted RBP2.78□□□□□ -1.96
HERC1-203ENST00000558532 OR5AC2Q9NZP5 309 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 C5AR2Q9P296 337 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 OR14J1Q9UGF5 321 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 MRM2Q9UI43 246 aaKnown RBP2.78□□□□□ -1.96
HERC1-203ENST00000558532 GNG8Q9UK08 70 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 GPR132Q9UNW8 380 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 MRPS33Q9Y291 106 aaKnown RBP2.78□□□□□ -1.96
HERC1-203ENST00000558532 NTNG1Q9Y2I2 539 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 PRG3Q9Y2Y8 225 aaPredicted RBP2.78□□□□□ -1.96
HERC1-203ENST00000558532 TMED7Q9Y3B3 224 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 MED31Q9Y3C7 131 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 GOLT1BQ9Y3E0 138 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 Q9Y3F1 56 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 CHTOPQ9Y3Y2 248 aaKnown RBP2.78□□□□□ -1.96
HERC1-203ENST00000558532 V9GYS6 101 aa2.78□□□□□ -1.96
HERC1-203ENST00000558532 MUC22E2RYF6 1773 aaPredicted RBP2.78□□□□□ -1.96
HERC1-203ENST00000558532 CPAMD8Q8IZJ3 1885 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 LRRK1Q38SD2 2015 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 LOC100509620A0A075B734 347 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 A0A087WV48 116 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 A0A087WYN8 130 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 A0A1W2PPV9 198 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 hDV102S1A0JD36 115 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 PRSS47A8MTI9 375 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 C4orf51C9J302 202 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 PPP5D1E7EU14 171 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 K7EPK0 472 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 M0R036 132 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 RTCAO00442 366 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms