RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 APOBEC3AP31941 199 aaPredicted RBP8.83□□□□□ -1
TPM1-212ENST00000558347 SEC61A1P61619 476 aaKnown RBP8.83□□□□□ -1
TPM1-212ENST00000558347 MFGE8Q08431 387 aaPredicted RBP8.83□□□□□ -1
TPM1-212ENST00000558347 AANATQ16613 207 aa8.83□□□□□ -1
TPM1-212ENST00000558347 NHLRC3Q5JS37 347 aa8.83□□□□□ -1
TPM1-212ENST00000558347 OTPQ5XKR4 325 aa8.83□□□□□ -1
TPM1-212ENST00000558347 ASPHD2Q6ICH7 369 aa8.83□□□□□ -1
TPM1-212ENST00000558347 RAB12Q6IQ22 244 aa8.83□□□□□ -1
TPM1-212ENST00000558347 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.83□□□□□ -1
TPM1-212ENST00000558347 OR2AJ1Q8NGZ0 328 aa8.83□□□□□ -1
TPM1-212ENST00000558347 LRRC20Q8TCA0 184 aa8.83□□□□□ -1
TPM1-212ENST00000558347 NUDT16L1Q9BRJ7 211 aaKnown RBP8.83□□□□□ -1
TPM1-212ENST00000558347 REG4Q9BYZ8 158 aa8.83□□□□□ -1
TPM1-212ENST00000558347 BARX1Q9HBU1 254 aaPredicted RBP8.83□□□□□ -1
TPM1-212ENST00000558347 TAS2R4Q9NYW5 299 aa8.83□□□□□ -1
TPM1-212ENST00000558347 SLC22A13Q9Y226 551 aa8.83□□□□□ -1
TPM1-212ENST00000558347 POLR1DQ9Y2S0 133 aa8.83□□□□□ -1
TPM1-212ENST00000558347 CSPG4Q6UVK1 2322 aa8.83□□□□□ -1
TPM1-212ENST00000558347 SVEP1Q4LDE5 3571 aa8.82□□□□□ -1
TPM1-212ENST00000558347 INAFM1C9JVW0 142 aa8.82□□□□□ -1
TPM1-212ENST00000558347 RP2O75695 350 aa8.82□□□□□ -1
TPM1-212ENST00000558347 HOXB1P14653 301 aaPredicted RBP8.82□□□□□ -1
TPM1-212ENST00000558347 CBR1P16152 277 aa8.82□□□□□ -1
TPM1-212ENST00000558347 HSD11B1P28845 292 aa8.82□□□□□ -1
TPM1-212ENST00000558347 S100A11P31949 105 aa8.82□□□□□ -1
TPM1-212ENST00000558347 NAAAQ02083 359 aa8.82□□□□□ -1
TPM1-212ENST00000558347 SRSF4Q08170 494 aaKnown RBP8.82□□□□□ -1
TPM1-212ENST00000558347 MEF2DQ14814 521 aa8.82□□□□□ -1
TPM1-212ENST00000558347 RAB35Q15286 201 aa8.82□□□□□ -1
TPM1-212ENST00000558347 SWI5Q1ZZU3 235 aa8.82□□□□□ -1
TPM1-212ENST00000558347 MST1LQ2TV78 715 aa8.82□□□□□ -1
TPM1-212ENST00000558347 FAAP20Q6NZ36 180 aa8.82□□□□□ -1
TPM1-212ENST00000558347 LPCAT3Q6P1A2 487 aa8.82□□□□□ -1
TPM1-212ENST00000558347 LYPD6Q86Y78 171 aa8.82□□□□□ -1
TPM1-212ENST00000558347 LINC00346Q8IVM7 164 aa8.82□□□□□ -1
TPM1-212ENST00000558347 SLC22A24Q8N4F4 322 aa8.82□□□□□ -1
TPM1-212ENST00000558347 GJC3Q8NFK1 279 aa8.82□□□□□ -1
TPM1-212ENST00000558347 OR51S1Q8NGJ8 323 aa8.82□□□□□ -1
TPM1-212ENST00000558347 OR10S1Q8NGN2 331 aa8.82□□□□□ -1
TPM1-212ENST00000558347 OR13C3Q8NGS6 347 aa8.82□□□□□ -1
TPM1-212ENST00000558347 SLAMF6Q96DU3 332 aa8.82□□□□□ -1
TPM1-212ENST00000558347 SEH1LQ96EE3 360 aa8.82□□□□□ -1
TPM1-212ENST00000558347 FBXO17Q96EF6 278 aa8.82□□□□□ -1
TPM1-212ENST00000558347 G6PC2Q9NQR9 355 aa8.82□□□□□ -1
TPM1-212ENST00000558347 SLC2A8Q9NY64 477 aa8.82□□□□□ -1
TPM1-212ENST00000558347 ASH2LQ9UBL3 628 aa8.82□□□□□ -1
TPM1-212ENST00000558347 FBLN5Q9UBX5 448 aa8.82□□□□□ -1
TPM1-212ENST00000558347 OR52A1Q9UKL2 312 aa8.82□□□□□ -1
TPM1-212ENST00000558347 IGHV4-30-2A0A087WSY4 118 aa8.81□□□□□ -1
TPM1-212ENST00000558347 LOC107986453A0A1B0GWG9 222 aa8.81□□□□□ -1
TPM1-212ENST00000558347 ZNF878C9JN71 531 aa8.81□□□□□ -1
TPM1-212ENST00000558347 I3L521 148 aa8.81□□□□□ -1
TPM1-212ENST00000558347 KDM4BO94953 1096 aa8.81□□□□□ -1
TPM1-212ENST00000558347 FARS2O95363 451 aaKnown RBP8.81□□□□□ -1
TPM1-212ENST00000558347 RAB3DO95716 219 aa8.81□□□□□ -1
TPM1-212ENST00000558347 CFDP00746 253 aaPredicted RBP8.81□□□□□ -1
TPM1-212ENST00000558347 CRYAAP02489 173 aa8.81□□□□□ -1
TPM1-212ENST00000558347 CD3DP04234 171 aa8.81□□□□□ -1
TPM1-212ENST00000558347 RLN1P04808 185 aa8.81□□□□□ -1
TPM1-212ENST00000558347 B4GALT1P15291 398 aa8.81□□□□□ -1
TPM1-212ENST00000558347 RPA2P15927 270 aa8.81□□□□□ -1
TPM1-212ENST00000558347 GSK3AP49840 483 aa8.81□□□□□ -1
TPM1-212ENST00000558347 MMP16P51512 607 aa8.81□□□□□ -1
TPM1-212ENST00000558347 IDH3GP51553 393 aaPredicted RBP8.81□□□□□ -1
TPM1-212ENST00000558347 PCBD1P61457 104 aa8.81□□□□□ -1
TPM1-212ENST00000558347 GUCA2AQ02747 115 aa8.81□□□□□ -1
TPM1-212ENST00000558347 HLXQ14774 488 aaPredicted RBP8.81□□□□□ -1
TPM1-212ENST00000558347 ODF4Q2M2E3 257 aa8.81□□□□□ -1
TPM1-212ENST00000558347 C3orf36Q3SXR2 165 aa8.81□□□□□ -1
TPM1-212ENST00000558347 CLVS2Q5SYC1 327 aa8.81□□□□□ -1
TPM1-212ENST00000558347 GLYATL3Q5SZD4 288 aa8.81□□□□□ -1
TPM1-212ENST00000558347 ARFGEF3Q5TH69 2177 aa8.81□□□□□ -1
TPM1-212ENST00000558347 CORO6Q6QEF8 472 aa8.81□□□□□ -1
TPM1-212ENST00000558347 ZNF813Q6ZN06 617 aa8.81□□□□□ -1
TPM1-212ENST00000558347 CFAP77Q6ZQR2 320 aa8.81□□□□□ -1
TPM1-212ENST00000558347 TMUB2Q71RG4 321 aa8.81□□□□□ -1
TPM1-212ENST00000558347 DPPA2Q7Z7J5 298 aa8.81□□□□□ -1
TPM1-212ENST00000558347 MDP1Q86V88 176 aa8.81□□□□□ -1
TPM1-212ENST00000558347 FAM169BQ8N8A8 192 aa8.81□□□□□ -1
TPM1-212ENST00000558347 SCARB1Q8WTV0 552 aa8.81□□□□□ -1
TPM1-212ENST00000558347 UQCC2Q9BRT2 126 aa8.81□□□□□ -1
TPM1-212ENST00000558347 MOB1AQ9H8S9 216 aa8.81□□□□□ -1
TPM1-212ENST00000558347 PNRC2Q9NPJ4 139 aaKnown RBP8.81□□□□□ -1
TPM1-212ENST00000558347 ZNF224Q9NZL3 707 aa8.81□□□□□ -1
TPM1-212ENST00000558347 RAB22AQ9UL26 194 aa8.81□□□□□ -1
TPM1-212ENST00000558347 GTF2A1LQ9UNN4 478 aa8.81□□□□□ -1
TPM1-212ENST00000558347 A0A096LNT2 108 aa8.8□□□□□ -1
TPM1-212ENST00000558347 hCG_1807616A0A1W2PRN6 198 aa8.8□□□□□ -1
TPM1-212ENST00000558347 TMEM82A0PJX8 343 aa8.8□□□□□ -1
TPM1-212ENST00000558347 METTL21EPA6NDL7 271 aa8.8□□□□□ -1
TPM1-212ENST00000558347 DISC1C4P0D8 188 aa8.8□□□□□ -1
TPM1-212ENST00000558347 LY6HO94772 140 aa8.8□□□□□ -1
TPM1-212ENST00000558347 BPNT1O95861 308 aa8.8□□□□□ -1
TPM1-212ENST00000558347 CYB5AP00167 134 aa8.8□□□□□ -1
TPM1-212ENST00000558347 HLA-HP01893 362 aa8.8□□□□□ -1
TPM1-212ENST00000558347 H2BFMP0C1H6 154 aa8.8□□□□□ -1
TPM1-212ENST00000558347 ZNF35P13682 527 aa8.8□□□□□ -1
TPM1-212ENST00000558347 TBPP20226 339 aa8.8□□□□□ -1
TPM1-212ENST00000558347 HGFACQ04756 655 aa8.8□□□□□ -1
TPM1-212ENST00000558347 FGL1Q08830 312 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms