RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 KCNIP4Q6PIL6 250 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 EIF3MQ7L2H7 374 aaKnown RBP4.3□□□□□ -1.72
RTF1-204ENST00000558117 RANBP3LQ86VV4 465 aaPredicted RBP4.3□□□□□ -1.72
RTF1-204ENST00000558117 SPATA24Q86W54 205 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 LRRC6Q86X45 466 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 LINC00518Q8N0U6 118 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 FBXO36Q8NEA4 188 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 OR51G2Q8NGK0 314 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 RAB1CQ92928 201 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 TMBIM1Q969X1 311 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 C7orf34Q96L11 122 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 PRRC1Q96M27 445 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 TM2D3Q9BRN9 247 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 RPF2Q9H7B2 306 aaKnown RBP4.3□□□□□ -1.72
RTF1-204ENST00000558117 PTGES2Q9H7Z7 377 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 MBD2Q9UBB5 411 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 VPREB3Q9UKI3 123 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 TBC1D24Q9ULP9 559 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 GMEB1Q9Y692 573 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 CACNG2Q9Y698 323 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 VPS13BQ7Z7G8 4022 aa4.3□□□□□ -1.72
RTF1-204ENST00000558117 IGHV3-15A0A0B4J1V0 119 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 OR6C65A6NJZ3 312 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 HSBP1L1C9JCN9 74 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 GOLGA8KD6RF30 607 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 K7EQG2 157 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 ZNF701M0R085 212 aaPredicted RBP4.29□□□□□ -1.72
RTF1-204ENST00000558117 TPST2O60704 377 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 GPR75O95800 540 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 TTC4O95801 387 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 ANGPTL1O95841 491 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 LYNP07948 512 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 SLC35E2BP0CK96 405 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 MPC1LP0DKB6 136 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 ADORA3P0DMS8 318 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 ETS2P15036 469 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 CD1DP15813 335 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 BCL3P20749 454 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 MSR1P21757 451 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 HIST1H1TP22492 207 aaPredicted RBP4.29□□□□□ -1.72
RTF1-204ENST00000558117 ATP5A1P25705 553 aaKnown RBP4.29□□□□□ -1.72
RTF1-204ENST00000558117 TTPAP49638 278 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 FHITP49789 147 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 RGS8P57771 180 aaPredicted RBP4.29□□□□□ -1.72
RTF1-204ENST00000558117 EWSR1Q01844 656 aaKnown RBP eCLIP4.29□□□□□ -1.72
RTF1-204ENST00000558117 ACVR1Q04771 509 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 C9orf135Q5VTT2 229 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 FAM71F2Q6NXP2 309 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 STEAP1BQ6NZ63 245 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 TMEM107Q6UX40 140 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 LRRN1Q6UXK5 716 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 UNQ9370/PRO34162Q6UXP9 181 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 Q6ZRG5 221 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 C3orf62Q6ZUJ4 267 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 TRMT10CQ7L0Y3 403 aaKnown RBP4.29□□□□□ -1.72
RTF1-204ENST00000558117 DHDDSQ86SQ9 333 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 TGIF2LXQ8IUE1 241 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 ZNF101Q8IZC7 436 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 PDIK1LQ8N165 341 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 ACOT4Q8N9L9 421 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 OR7G1Q8NGA0 311 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 OR52E4Q8NGH9 312 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 OR1F12Q8NHA8 337 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 PYROXD1Q8WU10 500 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 LHX4Q969G2 390 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 NABP1Q96AH0 204 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 TIMD4Q96H15 378 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 SERPINB12Q96P63 405 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 AIF1LQ9BQI0 150 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 RGCCQ9H4X1 137 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 ALG9Q9H6U8 611 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 CHRAC1Q9NRG0 131 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 MYEF2Q9P2K5 600 aaKnown RBP4.29□□□□□ -1.72
RTF1-204ENST00000558117 GHRLQ9UBU3 117 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 POLDIP2Q9Y2S7 368 aa4.29□□□□□ -1.72
RTF1-204ENST00000558117 CSDC2Q9Y534 153 aaKnown RBP4.29□□□□□ -1.72
RTF1-204ENST00000558117 IGLV3-32A0A0A0MS00 114 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 IGHV1-69-2A0A0G2JMI3 117 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 A0A1W2PPE3 182 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 OR7A17O14581 309 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 FADS1O60427 444 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 SCELO95171 688 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 EVI2BP34910 448 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 MAGEA6P43360 314 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 PPICP45877 212 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 CCL8P80075 99 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 SARNPP82979 210 aaKnown RBP4.28□□□□□ -1.72
RTF1-204ENST00000558117 STX5Q13190 355 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 MICBQ29980 383 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 PLPPR5Q32ZL2 321 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 TTMPQ5BVD1 217 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 PLCXD3Q63HM9 321 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 TMEM53Q6P2H8 277 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 C4orf22Q6V702 233 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 CCDC80Q76M96 950 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 LRP11Q86VZ4 500 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 CTAGE3PQ8IX95 158 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 MREGQ8N565 214 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 OR4K14Q8NGD5 310 aa4.28□□□□□ -1.72
RTF1-204ENST00000558117 OR13F1Q8NGS4 319 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms