RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 TMEM56Q96MV1 263 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 DOK1Q99704 481 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 RTBDNQ9BSG5 229 aaPredicted RBP1.96□□□□□ -2.1
SPG11-206ENST00000558093 SCRT1Q9BWW7 348 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 OSBPL11Q9BXB4 747 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 SELENOIQ9C0D9 397 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 SPNS1Q9H2V7 528 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 CLMPQ9H6B4 373 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 UBE2ZQ9H832 354 aaPredicted RBP1.96□□□□□ -2.1
SPG11-206ENST00000558093 MCUBQ9NWR8 336 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 TAS2R1Q9NYW7 299 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 VAPAQ9P0L0 249 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 DUX4Q9UBX2 424 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 ZNF391Q9UJN7 358 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 DKKL1Q9UK85 242 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 VPREB3Q9UKI3 123 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 KCNIP3Q9Y2W7 256 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 GOLT1BQ9Y3E0 138 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 SAR1BQ9Y6B6 198 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 TMEM56-RWDD3S4R434 201 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 TMEM131Q92545 1883 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 PLEKHH1Q9ULM0 1364 aa1.96□□□□□ -2.1
SPG11-206ENST00000558093 VWA8A3KMH1 1905 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 C9orf84Q5VXU9 1444 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 PDS5BQ9NTI5 1447 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 A0A0B4J2E0 115 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 A0A1B0GX12 115 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 TCRBV9S1A1TA0A576 114 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 TSPAN11A1L157 253 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 TMEM150BA6NC51 233 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 LRCOL1A6NCL2 159 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 METTL15A6NJ78 407 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 HACD1B0YJ81 288 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 C11orf94C9JXX5 98 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 TSTD3H0UI37 97 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 HSD17B6O14756 317 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 CHP2O43745 196 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 SSNA1O43805 119 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 EIF1BO60739 113 aaKnown RBP1.95□□□□□ -2.1
SPG11-206ENST00000558093 ALOX12BO75342 701 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 TTC4O95801 387 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 MT-ND4P03905 459 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 KLK3P07288 261 aaPredicted RBP1.95□□□□□ -2.1
SPG11-206ENST00000558093 CTSLP07711 333 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 CST2P09228 141 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 ACSM4P0C7M7 580 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 CHTF8P0CG12 524 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 LIMS3P0CW19 117 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 LIMS4P0CW20 117 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 C8orf88P0DMB2 117 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 SCGB1A1P11684 91 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 AKR1C4P17516 323 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 S100PP25815 95 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 S100A7P31151 101 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 OPRD1P41143 372 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 EIF1P41567 113 aaKnown RBP1.95□□□□□ -2.1
SPG11-206ENST00000558093 TTPAP49638 278 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 RAB7AP51149 207 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 ZNF121P58317 390 aaPredicted RBP1.95□□□□□ -2.1
SPG11-206ENST00000558093 TAS2R39P59534 338 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 TAS2R31P59538 309 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 POU6F1Q14863 301 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 ATP6AP1Q15904 470 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 PSMD5Q16401 504 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 DUSP7Q16829 419 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 ARHGAP11BQ3KRB8 267 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 KLF17Q5JT82 389 aaPredicted RBP1.95□□□□□ -2.1
SPG11-206ENST00000558093 TMEM42Q69YG0 159 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 SLC25A48Q6ZT89 311 aaKnown RBP1.95□□□□□ -2.1
SPG11-206ENST00000558093 RFLNAQ6ZTI6 216 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 C6orf120Q7Z4R8 191 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 FAM19A1Q7Z5A9 133 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 CMC1Q7Z7K0 106 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 TMEM135Q86UB9 458 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 KIR3DL3Q8N743 410 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 CLDN22Q8N7P3 220 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 WDR31Q8NA23 367 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 OR10G3Q8NGC4 313 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 OR6K6Q8NGW6 343 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 OR9G1Q8NH87 305 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 C16orf78Q8WTQ4 265 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 TMEM234Q8WY98 164 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 ARPC1AQ92747 370 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 YIPF5Q969M3 257 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 SMIM19Q96E16 107 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 MRPL48Q96GC5 212 aaKnown RBP1.95□□□□□ -2.1
SPG11-206ENST00000558093 OR5B12Q96R08 314 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 P2RX4Q99571 388 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 NIPSNAP3BQ9BS92 247 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 TMED9Q9BVK6 235 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 PECRQ9BY49 303 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 RAB34Q9BZG1 259 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 SLC19A3Q9BZV2 496 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 OR11A1Q9GZK7 315 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 YIPF3Q9GZM5 350 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 NXF2Q9GZY0 626 aaKnown RBP1.95□□□□□ -2.1
SPG11-206ENST00000558093 DSN1Q9H410 356 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 NIPAL2Q9H841 368 aa1.95□□□□□ -2.1
SPG11-206ENST00000558093 NHEJ1Q9H9Q4 299 aaPredicted RBP1.95□□□□□ -2.1
SPG11-206ENST00000558093 GLTPQ9NZD2 209 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms