RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 SATL1Q86VE3 508 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 ZNF561Q8N587 486 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 FAM216BQ8N7L0 139 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 TBC1D15Q8TC07 691 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 NRG4Q8WWG1 115 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 EMG1Q92979 244 aaKnown RBP6.92□□□□□ -1.3
PSEN1-223ENST00000557511 SLAMF9Q96A28 289 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 SMIM19Q96E16 107 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 PCGF1Q9BSM1 259 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 KRTAP4-6Q9BYQ5 205 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 CCDC90BQ9GZT6 254 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 FGF23Q9GZV9 251 aaPredicted RBP6.92□□□□□ -1.3
PSEN1-223ENST00000557511 CNTD2Q9H8S5 307 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 ELL3Q9HB65 397 aaPredicted RBP6.92□□□□□ -1.3
PSEN1-223ENST00000557511 PCDHB16Q9NRJ7 776 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 ONECUT1Q9UBC0 465 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 CTSZQ9UBR2 303 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 NUP50Q9UKX7 468 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 RAB26Q9ULW5 256 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 C2CD3Q4AC94 2353 aa6.92□□□□□ -1.3
PSEN1-223ENST00000557511 CHD3Q12873 2000 aaKnown RBP6.92□□□□□ -1.3
PSEN1-223ENST00000557511 TLN2Q9Y4G6 2542 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 SETD2Q9BYW2 2564 aaPredicted RBP6.91□□□□□ -1.3
PSEN1-223ENST00000557511 TRBV23-1A0A0A0MS06 115 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 hCG_1809904A0A1W2PP81 198 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 A0A1W2PPE2 198 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 A0A1W2PR64 198 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 A0A1W2PRV1 198 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 ZNF879B4DU55 563 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 E9PI62 339 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 OGG1O15527 345 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 RGS10O43665 173 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 TOX4O94842 621 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 CDK1P06493 297 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 MYF6P23409 242 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 EEF1B2P24534 225 aaKnown RBP6.91□□□□□ -1.3
PSEN1-223ENST00000557511 MAPK3P27361 379 aaPredicted RBP6.91□□□□□ -1.3
PSEN1-223ENST00000557511 BMXP51813 675 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 CAV3P56539 151 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 BPIFB3P59826 476 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 FGF12P61328 243 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 HOXA4Q00056 320 aaPredicted RBP6.91□□□□□ -1.3
PSEN1-223ENST00000557511 PAX8Q06710 450 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 PDCD1Q15116 288 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 YIF1BQ5BJH7 314 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 ZNF841Q6ZN19 808 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 CALHM1Q8IU99 346 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 FAM185AQ8N0U4 392 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 PARP16Q8N5Y8 322 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 ASCC1Q8N9N2 400 aaKnown RBP6.91□□□□□ -1.3
PSEN1-223ENST00000557511 OR51A4Q8NGJ6 313 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 OR5D13Q8NGL4 314 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 ANGPTL6Q8NI99 470 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 GHSRQ92847 366 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 TMEM106AQ96A25 262 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 SEH1LQ96EE3 360 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 CNBD2Q96M20 576 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 ZNF488Q96MN9 340 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 GAFA1Q96PS6 74 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 NRIP2Q9BQI9 281 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 ZNF649Q9BS31 505 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 ANKRD60Q9BZ19 345 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 RHOFQ9HBH0 211 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 SMURF1Q9HCE7 757 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 CLEC2DQ9UHP7 191 aa6.91□□□□□ -1.3
PSEN1-223ENST00000557511 RPUSD1Q9UJJ7 312 aaKnown RBP6.91□□□□□ -1.3
PSEN1-223ENST00000557511 NSD1Q96L73 2696 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-223ENST00000557511 TRAV40A0A0B4J280 105 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 PNMA8CA0A1B0GUJ8 204 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 FUOMA2VDF0 154 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 RNF212BA8MTL3 300 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 C22orf46C9J442 243 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-223ENST00000557511 TRIM77I1YAP6 450 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 TNFRSF13BO14836 293 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-223ENST00000557511 PRKACAP17612 351 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 CELP19835 753 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 C21orf33P30042 268 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-223ENST00000557511 ARF6P62330 175 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 BDH1Q02338 343 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 PDZK1IP1Q13113 114 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 MED22Q15528 200 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 Q499Y3 187 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 RBM48Q5RL73 367 aaKnown RBP6.9□□□□□ -1.3
PSEN1-223ENST00000557511 RNLSQ5VYX0 342 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 GDPD3Q7L5L3 318 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 PRIMA1Q86XR5 153 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 SAXO1Q8IYX7 474 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 FAM58AQ8N1B3 248 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 BATF2Q8N1L9 274 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 MS4A15Q8N5U1 240 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 NANOGP1Q8N7R0 232 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 ZNRF1Q8ND25 227 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 OR10AC1Q8NH08 325 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 RFT1Q96AA3 541 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 UPRTQ96BW1 309 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 SDSLQ96GA7 329 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 WDFY2Q96P53 400 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 FANCD2OSQ96PS1 177 aa6.9□□□□□ -1.3
PSEN1-223ENST00000557511 DCTN5Q9BTE1 182 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms