RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 LMO4P61968 165 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 BTG1P62324 171 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 PLA1AQ53H76 456 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 TMEM69Q5SWH9 247 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 RSBN1Q5VWQ0 802 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-230ENST00000557427 LYPD6Q86Y78 171 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 SERPINA12Q8IW75 414 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 BPIFB2Q8N4F0 458 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 OR51F2Q8NH61 342 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 SLC25A28Q96A46 364 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 CREB3L1Q96BA8 519 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 FAM3DQ96BQ1 224 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 POM121L2Q96KW2 1035 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 BCL2L14Q9BZR8 327 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 COPZ2Q9P299 210 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 MRPS7Q9Y2R9 242 aaKnown RBP10.54□□□□□ -0.72
SHMT2-230ENST00000557427 RBMX2Q9Y388 322 aaKnown RBP10.54□□□□□ -0.72
SHMT2-230ENST00000557427 RER1O15258 196 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 XRCC3O43542 346 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 ORC5O43913 435 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 APOC1P02654 83 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 ZNF250P15622 560 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 CDK2P24941 298 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 HTR2CP28335 458 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 RBMXP38159 391 aaKnown RBP10.53□□□□□ -0.72
SHMT2-230ENST00000557427 CX3CR1P49238 355 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 POU3F4P49335 361 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 KLF3P57682 345 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-230ENST00000557427 ZNF121P58317 390 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-230ENST00000557427 TAS2R20P59543 309 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 CD300CQ08708 224 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 KLF9Q13886 244 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-230ENST00000557427 C2orf76Q3KRA6 126 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 ELFN2Q5R3F8 820 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 ZNF529Q6P280 563 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 PRSS45Q7RTY3 260 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 IZUMO1Q8IYV9 350 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 ZNF101Q8IZC7 436 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 CCDC54Q8NEL0 328 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 OR51D1Q8NGF3 324 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 OR8B12Q8NGG6 310 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 FCAMRQ8WWV6 532 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 DVL3Q92997 716 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-230ENST00000557427 PTX4Q96A99 478 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 DPAGT1Q9H3H5 408 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 NLKQ9UBE8 527 aa10.53□□□□□ -0.72
SHMT2-230ENST00000557427 A0A0A6YYH2 397 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 TRAV20A0A0B4J274 112 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 TMEM272A0A1B0GTI8 110 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 NAP1L6A6NFF2 107 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 A6NJ64 397 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 CCNKO75909 580 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 NGFP01138 241 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 FSHBP01225 129 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 IGLV3-1P01715 115 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 MDKP21741 143 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-230ENST00000557427 PRTN3P24158 256 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 BDKRB2P30411 391 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 GCH1P30793 250 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 OTX1P32242 354 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-230ENST00000557427 BTCP35070 178 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 GDNFP39905 211 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 EIF2B2P49770 351 aaKnown RBP10.52□□□□□ -0.73
SHMT2-230ENST00000557427 PRKXP51817 358 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 AP3S2P59780 193 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 IL13RA1P78552 427 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 ZNF718Q3SXZ3 478 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 CCDC92Q53HC0 331 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-230ENST00000557427 Q6ZSR3 168 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 DOK3Q7L591 496 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 KRT74Q7RTS7 529 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 CDH26Q8IXH8 852 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 ZNF283Q8N7M2 679 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 PLPP7Q8NBV4 271 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 OR1M1Q8NGA1 313 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 OR51A2Q8NGJ7 313 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 OR5D14Q8NGL3 314 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 SLC25A40Q8TBP6 338 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 DEDD2Q8WXF8 326 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 GTF3AQ92664 365 aaKnown RBP10.52□□□□□ -0.73
SHMT2-230ENST00000557427 UPRTQ96BW1 309 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 FGGYQ96C11 551 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 OR2J1Q9GZK6 312 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 AUNIPQ9H7T9 357 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 TMEM138Q9NPI0 162 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 DIABLOQ9NR28 239 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 GPR160Q9UJ42 338 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 RHBDD3Q9Y3P4 386 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 NUBP2Q9Y5Y2 271 aa10.52□□□□□ -0.73
SHMT2-230ENST00000557427 A0A0B4J293 547 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 A0A0U1RQV5 110 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 GGT3PA6NGU5 568 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 DNAJC9-AS1A6NH13 148 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 C17orf100A8MU93 164 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 INMT-MINDY4F8WBC2 141 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 LDLRAD4O15165 306 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 TPD52L2O43399 206 aaKnown RBP10.51□□□□□ -0.73
SHMT2-230ENST00000557427 SGCEO43556 437 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 DOK2O60496 412 aa10.51□□□□□ -0.73
SHMT2-230ENST00000557427 CDC14BO60729 498 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms