RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 NRASP01111 189 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 IGHV1-8P0DP01 117 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 HOXD3P31249 432 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-223ENST00000556689 HAAOP46952 286 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 ALDH3A2P51648 485 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 PPP1R8Q12972 351 aaKnown RBP10.14□□□□□ -0.79
SHMT2-223ENST00000556689 LRRC36Q1X8D7 754 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 MINOS1Q5TGZ0 78 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 KRT77Q7Z794 578 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 COMMD2Q86X83 199 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 CBR4Q8N4T8 237 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 DPF1Q92782 380 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 MYDGFQ969H8 173 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 RDH12Q96NR8 316 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 DGCR6LQ9BY27 220 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 GPR61Q9BZJ8 451 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 Q9H521 79 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 PAPOLBQ9NRJ5 636 aaKnown RBP10.14□□□□□ -0.79
SHMT2-223ENST00000556689 OR14J1Q9UGF5 321 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 PIGLQ9Y2B2 252 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 POLDIP2Q9Y2S7 368 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 MINOS1-NBL1R4GNA1 71 aa10.14□□□□□ -0.79
SHMT2-223ENST00000556689 TMEM269A0A1B0GVZ9 245 aa10.13□□□□□ -0.79
SHMT2-223ENST00000556689 J3QT63 122 aa10.13□□□□□ -0.79
SHMT2-223ENST00000556689 EI24O14681 340 aa10.13□□□□□ -0.79
SHMT2-223ENST00000556689 JUNBP17275 347 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-223ENST00000556689 DCTN2Q13561 401 aaKnown RBP10.13□□□□□ -0.79
SHMT2-223ENST00000556689 ZNF684Q5T5D7 378 aa10.13□□□□□ -0.79
SHMT2-223ENST00000556689 OGFRL1Q5TC84 451 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-223ENST00000556689 LCN1P1Q5VSP4 162 aa10.13□□□□□ -0.79
SHMT2-223ENST00000556689 C16orf82Q7Z2V1 217 aa10.13□□□□□ -0.79
SHMT2-223ENST00000556689 ZNF555Q8NEP9 628 aa10.13□□□□□ -0.79
SHMT2-223ENST00000556689 OR4X2Q8NGF9 303 aa10.13□□□□□ -0.79
SHMT2-223ENST00000556689 NDNFQ8TB73 568 aa10.13□□□□□ -0.79
SHMT2-223ENST00000556689 TEX47Q8TBZ9 253 aa10.13□□□□□ -0.79
SHMT2-223ENST00000556689 CAPSLQ8WWF8 208 aa10.13□□□□□ -0.79
SHMT2-223ENST00000556689 AKR1E2Q96JD6 320 aa10.13□□□□□ -0.79
SHMT2-223ENST00000556689 NRIP2Q9BQI9 281 aa10.13□□□□□ -0.79
SHMT2-223ENST00000556689 ENPP5Q9UJA9 477 aa10.13□□□□□ -0.79
SHMT2-223ENST00000556689 SLC22A13Q9Y226 551 aa10.13□□□□□ -0.79
SHMT2-223ENST00000556689 MEX3AA1L020 520 aaKnown RBP10.12□□□□□ -0.79
SHMT2-223ENST00000556689 PRR23D1E9PI22 279 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-223ENST00000556689 H3BN98 237 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 LPLP06858 475 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 CHRM2P08172 466 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 PRR23D2P0DMB1 279 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-223ENST00000556689 ALOX5APP20292 161 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 EDDM3BP56851 147 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 ACTA2P62736 377 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 ACTG2P63267 376 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 ACTC1P68032 377 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 ACTA1P68133 377 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 COL10A1Q03692 680 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 KHDC1LQ5JSQ8 128 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 LPCAT4Q643R3 524 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 PLBD1Q6P4A8 553 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 DEGS2Q6QHC5 323 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 CD300LDQ6UXZ3 194 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 GDPD3Q7L5L3 318 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 BATF2Q8N1L9 274 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 IQCF1Q8N6M8 205 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 ASCC1Q8N9N2 400 aaKnown RBP10.12□□□□□ -0.79
SHMT2-223ENST00000556689 OR51E1Q8TCB6 317 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 ZNF714Q96N38 554 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 FEVQ99581 238 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 TEAD3Q99594 435 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 PBOV1Q9GZY1 135 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 HES4Q9HCC6 221 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 GPR84Q9NQS5 396 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 FAM206AQ9NX38 181 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 SMPD3Q9NY59 655 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-223ENST00000556689 VNN3Q9NY84 501 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 NKX1-2Q9UD57 310 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-223ENST00000556689 LAMP5Q9UJQ1 280 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 KLHDC2Q9Y2U9 406 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 TENM3Q9P273 2699 aa10.12□□□□□ -0.79
SHMT2-223ENST00000556689 NHLRC4P0CG21 123 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-223ENST00000556689 HTR1DP28221 377 aa10.11□□□□□ -0.79
SHMT2-223ENST00000556689 HCCSP53701 268 aa10.11□□□□□ -0.79
SHMT2-223ENST00000556689 MEF2CQ06413 473 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-223ENST00000556689 IL18R1Q13478 541 aa10.11□□□□□ -0.79
SHMT2-223ENST00000556689 ABCA11PQ4W5N1 156 aa10.11□□□□□ -0.79
SHMT2-223ENST00000556689 CLVS2Q5SYC1 327 aa10.11□□□□□ -0.79
SHMT2-223ENST00000556689 FAHD1Q6P587 224 aa10.11□□□□□ -0.79
SHMT2-223ENST00000556689 KCTD18Q6PI47 426 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-223ENST00000556689 IZUMO2Q6UXV1 221 aa10.11□□□□□ -0.79
SHMT2-223ENST00000556689 LINC00482Q8N8I6 264 aa10.11□□□□□ -0.79
SHMT2-223ENST00000556689 NIPSNAP1Q9BPW8 284 aa10.11□□□□□ -0.79
SHMT2-223ENST00000556689 MROQ9BYG7 248 aa10.11□□□□□ -0.79
SHMT2-223ENST00000556689 RIBC2Q9H4K1 309 aa10.11□□□□□ -0.79
SHMT2-223ENST00000556689 LIN7BQ9HAP6 207 aa10.11□□□□□ -0.79
SHMT2-223ENST00000556689 IGHV2-26A0A0B4J1V2 119 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 hADV38S2A0JD32 116 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 PQLC2LA1A4F0 135 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 H0YJX3 145 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 PSMD9O00233 223 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 DLGAP1O14490 977 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 PRODHO43272 600 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 DHRS3O75911 302 aa10.1□□□□□ -0.79
SHMT2-223ENST00000556689 IGLV3-1P01715 115 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms