RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 FOXC2Q99958 501 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 CST11Q9H112 138 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 HMG20AQ9NP66 347 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 ABRACLQ9P1F3 81 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 DNAJB11Q9UBS4 358 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 GLS2Q9UI32 602 aa10.47□□□□□ -0.73
SHMT2-221ENST00000555773 NBPF19A0A087WUL8 3843 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 SMIM30A4D0T7 59 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 OOEPA6NGQ2 149 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 H3BUI4 141 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 HTR3BO95264 441 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 KNG1P01042 644 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 VSIG8P0DPA2 414 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 SLC2A2P11168 524 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-221ENST00000555773 CPT2P23786 658 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 MDH2P40926 338 aaKnown RBP10.46□□□□□ -0.73
SHMT2-221ENST00000555773 BTG1P62324 171 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 QRFPP83859 136 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 ZNF146Q15072 292 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 P2RY14Q15391 338 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 FAM189A2Q15884 450 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 CLEC12BQ2HXU8 276 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 NHLRC3Q5JS37 347 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 SPIN3Q5JUX0 258 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 OSR2Q8N2R0 312 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 MUC20Q8N307 709 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-221ENST00000555773 OR51D1Q8NGF3 324 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 OR51T1Q8NGJ9 327 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 DYNC2LI1Q8TCX1 351 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 C10orf105Q8TEF2 133 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 AP3S1Q92572 193 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 EMG1Q92979 244 aaKnown RBP10.46□□□□□ -0.73
SHMT2-221ENST00000555773 PIMREGQ9BSJ6 248 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 WDR13Q9H1Z4 485 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 LIN7BQ9HAP6 207 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 TMEM165Q9HC07 324 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 RBFOX1Q9NWB1 397 aaKnown RBP10.46□□□□□ -0.73
SHMT2-221ENST00000555773 DCAF16Q9NXF7 216 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 NLKQ9UBE8 527 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 RAB22AQ9UL26 194 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 WIPI2Q9Y4P8 454 aa10.46□□□□□ -0.73
SHMT2-221ENST00000555773 OR2AT4A6NND4 320 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 TMEM14DPA8MWL7 114 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 F8VVB4 439 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 F8VWA3 439 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-221ENST00000555773 WNT9BO14905 357 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 LDLRAD4O15165 306 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 CRTAPO75718 401 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-221ENST00000555773 IGHV2-70P01814 119 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 PRKACAP17612 351 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 EGR1P18146 543 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 CLDN12P56749 244 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 IL13RA2Q14627 380 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 TMEM155Q4W5P6 130 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 FAM201AQ5SY85 155 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 ATPAF1Q5TC12 328 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-221ENST00000555773 SFRP4Q6FHJ7 346 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-221ENST00000555773 LINC00596Q86U02 117 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 DEFB108BQ8NET1 73 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 BARHL1Q9BZE3 327 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 DNTTIP1Q9H147 329 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 CCDC59Q9P031 241 aaKnown RBP10.45□□□□□ -0.74
SHMT2-221ENST00000555773 OR5V1Q9UGF6 321 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 ETV7Q9Y603 341 aa10.45□□□□□ -0.74
SHMT2-221ENST00000555773 FAM90A10PA6NDY2 464 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 FAM90A18PA6NE21 464 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 FAM90A16PA6NEW6 464 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 FAM90A20PA6NIJ5 464 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 FAM90A8PA6NJQ4 464 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 FAM90A7PA6NKC0 464 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 RFPL4AA6NLU0 287 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 FAM90A22PA8MWA6 464 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 FAM90A12PA8MX19 464 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 FAM90A5PA8MXJ8 464 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 FAM90A23PA8MXZ1 464 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 VWC2LB2RUY7 222 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 C3orf80F5H4A9 247 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 RFPL4AL1F8VTS6 287 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 SH2D1BO14796 132 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 TNFRSF13BO14836 293 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-221ENST00000555773 FAM90A15PP0C7V4 464 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 FAM90A13PP0C7W8 464 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 FAM90A14PP0C7W9 464 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 FAM90A24PP0C7X0 464 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 PSG2P11465 335 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 SLC25A16P16260 332 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 MGMTP16455 207 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 RAB6AP20340 208 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 SERPINA2P20848 420 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 PRDX2P32119 198 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 CD80P33681 288 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 GMFBP60983 142 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 ZMYND11Q15326 602 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 ZNF404Q494X3 552 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 FOXB2Q5VYV0 432 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 MZT2AQ6P582 158 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 SPICQ8N5J4 248 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 TMEM104Q8NE00 496 aa10.44□□□□□ -0.74
SHMT2-221ENST00000555773 OR10K1Q8NGX5 313 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms