RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 VSX2P58304 361 aaPredicted RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 TAS2R39P59534 338 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 RAB10P61026 200 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 RBX1P62877 108 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 DYNLL1P63167 89 aaKnown RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 KCNJ2P63252 427 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 HPCAP84074 193 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 FAM3AP98173 230 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 OGDHQ02218 1023 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 RELAQ04206 551 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 RIPPLY1Q0D2K3 151 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 BAMBIQ13145 260 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 GK3PQ14409 553 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 POU6F1Q14863 301 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 PSG5Q15238 335 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 UBE2V2Q15819 145 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 NDUFA9Q16795 377 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 CYP51A1Q16850 503 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 TMEM176BQ3YBM2 270 aaPredicted RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 VPS26BQ4G0F5 336 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 PDZD11Q5EBL8 140 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 SAMD4BQ5PRF9 694 aaKnown RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 MARC1Q5VT66 337 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 SYPL2Q5VXT5 272 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 SLX4IPQ5VYV7 408 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 STUMQ69YW2 141 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 CYB5R2Q6BCY4 276 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 FAM45BPQ6NSW5 357 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 DNM1P34Q6PK57 102 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 FAM131AQ6UXB0 335 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 TMEM179Q6ZVK1 233 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 AHSA2Q719I0 299 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 GDPD3Q7L5L3 318 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 SSX6Q7RTT6 188 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 APTXQ7Z2E3 356 aaKnown RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 PEX26Q7Z412 305 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 DHDDSQ86SQ9 333 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 NRMQ8IXM6 262 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 C9orf40Q8IXQ3 194 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 IFT20Q8IY31 132 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 TMEM251Q8N6I4 163 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 SDR9C7Q8NEX9 313 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 ATP6V1C2Q8NEY4 427 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 OR5AU1Q8NGC0 362 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 OR4A4PQ8NGN8 299 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 OR9A4Q8NGU2 314 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 OR6N2Q8NGY6 317 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 OR5AK3PQ8NH89 298 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 STOML3Q8TAV4 291 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 TMEM158Q8WZ71 300 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 TMBIM1Q969X1 311 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 PTH2Q96A98 100 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 EXOSC8Q96B26 276 aaKnown RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 C12orf43Q96C57 262 aaKnown RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 SMIM12Q96EX1 92 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 MRPL48Q96GC5 212 aaKnown RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 PDXPQ96GD0 296 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 Q96MT0 163 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 OR2V2Q96R30 315 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 RNF2Q99496 336 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 C2orf88Q9BSF0 95 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 TMEM109Q9BVC6 243 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 TM2D1Q9BX74 207 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 ELOVL4Q9GZR5 314 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 COMMD4Q9H0A8 199 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 SYT4Q9H2B2 425 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 UGT1A7Q9HAW7 530 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 UGT1A10Q9HAW8 530 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 PLEKHA1Q9HB21 404 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 POLD4Q9HCU8 107 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 RGS18Q9NS28 235 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 Q9UF83 564 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 KLHL21Q9UJP4 597 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 OR52A1Q9UKL2 312 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 NPIPA1Q9UND3 350 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 TP53TG5Q9Y2B4 290 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 GOLT1BQ9Y3E0 138 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 ASB4Q9Y574 426 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 CDH10Q9Y6N8 788 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 SVEP1Q4LDE5 3571 aa2.47□□□□□ -2.01
SRP54-209ENST00000555746 INTS1Q8N201 2190 aaKnown RBP2.47□□□□□ -2.01
SRP54-209ENST00000555746 A0A1B0GVI7 797 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 PRSS37A4D1T9 235 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 LRRC30A6NM36 301 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 FAM25AB3EWG3 89 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 FAM25CB3EWG5 89 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 FAM25GB3EWG6 89 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 DISC1C4P0D8 188 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 PRMT5O14744 637 aaPredicted RBP2.46□□□□□ -2.02
SRP54-209ENST00000555746 TGOLN2O43493 480 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 SGCEO43556 437 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 PRKYO43930 277 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 SLC19A2O60779 497 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 FCN3O75636 299 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 S100A8P05109 93 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 CDK1P06493 297 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 C2P06681 752 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 KCNE1P15382 129 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 HLA-GP17693 338 aa2.46□□□□□ -2.02
SRP54-209ENST00000555746 CSNK2A2P19784 350 aaPredicted RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms