RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 NPBWR2P48146 333 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 PPP1CBP62140 327 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 CD83Q01151 205 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 ZNF273Q14593 569 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 PIGYQ3MUY2 71 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 PRR30Q53SZ7 412 aaPredicted RBP7.61□□□□□ -1.19
TDP1-210ENST00000554976 FAM180AQ6UWF9 173 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 BEND4Q6ZU67 534 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 LHFPL1Q86WI0 220 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 OR10AD1Q8NGE0 317 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 OR51I2Q9H344 312 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 MTCH1Q9NZJ7 389 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 VSIG4Q9Y279 399 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 RAXQ9Y2V3 346 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 BOD1L1Q8NFC6 3051 aa7.61□□□□□ -1.19
TDP1-210ENST00000554976 GTF3C1Q12789 2109 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 IGKV1D-8A0A087WSZ0 117 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 FAM90A10PA6NDY2 464 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 FAM90A18PA6NE21 464 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 FAM90A16PA6NEW6 464 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 FAM90A20PA6NIJ5 464 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 FAM90A8PA6NJQ4 464 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 FAM90A7PA6NKC0 464 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 FAM90A22PA8MWA6 464 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 SNRPGP15A8MWD9 76 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 FAM90A12PA8MX19 464 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 FAM90A5PA8MXJ8 464 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 FAM90A23PA8MXZ1 464 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 SLC22A5O76082 557 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 FAM90A15PP0C7V4 464 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 FAM90A13PP0C7W8 464 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 FAM90A14PP0C7W9 464 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 FAM90A24PP0C7X0 464 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 CCKARP32238 428 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 UCP2P55851 309 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 FLI1Q01543 452 aaPredicted RBP7.6□□□□□ -1.19
TDP1-210ENST00000554976 MEF2DQ14814 521 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 ZNF782Q6ZMW2 699 aaPredicted RBP7.6□□□□□ -1.19
TDP1-210ENST00000554976 C6orf201Q7Z4U5 140 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 OSR2Q8N2R0 312 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 OR8S1Q8NH09 359 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 SPOCK3Q9BQ16 436 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 SEC22CQ9BRL7 303 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 GINS4Q9BRT9 223 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 PAPOLGQ9BWT3 736 aaKnown RBP7.6□□□□□ -1.19
TDP1-210ENST00000554976 CHST6Q9GZX3 395 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 SLC7A11Q9UPY5 501 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 AMDHD2Q9Y303 409 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 F8W036 122 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 RRP8O43159 456 aaKnown RBP7.6□□□□□ -1.19
TDP1-210ENST00000554976 TMEM225BP0DP42 221 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 RAC2P15153 192 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 BCL3P20749 454 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 KITLGP21583 273 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 BLVRBP30043 206 aaPredicted RBP7.6□□□□□ -1.19
TDP1-210ENST00000554976 HRH1P35367 487 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 MPV17P39210 176 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 GPM6AP51674 278 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 UBE2NP61088 152 aaKnown RBP7.6□□□□□ -1.19
TDP1-210ENST00000554976 IL24Q13007 206 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 AANATQ16613 207 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 ALKBH6Q3KRA9 238 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 ATPAF1Q5TC12 328 aaPredicted RBP7.6□□□□□ -1.19
TDP1-210ENST00000554976 MBNL2Q5VZF2 373 aaKnown RBP7.6□□□□□ -1.19
TDP1-210ENST00000554976 PEG10Q86TG7 708 aaKnown RBP7.6□□□□□ -1.19
TDP1-210ENST00000554976 SPICQ8N5J4 248 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 CHST4Q8NCG5 386 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 OR5L1Q8NGL2 311 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 C12orf57Q99622 126 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 SULT4A1Q9BR01 284 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 BEX2Q9BXY8 128 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 OR2J1Q9GZK6 312 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 TLNRD1Q9H1K6 362 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 ING3Q9NXR8 418 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 TINAGQ9UJW2 476 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 FAM186AA6NE01 2351 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 IGHV2OR16-5A0A0B4J2B6 119 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 A0A0G2JNJ9 132 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 OR2AT4A6NND4 320 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 GEMIN2O14893 280 aaKnown RBP7.6□□□□□ -1.19
TDP1-210ENST00000554976 CYB5AP00167 134 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 IDH3GP51553 393 aaPredicted RBP7.6□□□□□ -1.19
TDP1-210ENST00000554976 FGF12P61328 243 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 ERVK11-1P61568 191 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 RSU1Q15404 277 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 IGFBP7Q16270 282 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 MSMPQ1L6U9 139 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 ZNF660Q6AZW8 331 aaPredicted RBP7.6□□□□□ -1.19
TDP1-210ENST00000554976 C22orf34Q6ZV56 151 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 BEST4Q8NFU0 473 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 SLC25A40Q8TBP6 338 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 SNRNP40Q96DI7 357 aaKnown RBP7.6□□□□□ -1.19
TDP1-210ENST00000554976 SLC25A21Q9BQT8 299 aaPredicted RBP7.6□□□□□ -1.19
TDP1-210ENST00000554976 PKIBQ9C010 78 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 DECR2Q9NUI1 292 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 PIPOXQ9P0Z9 390 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 Q9UFV3 132 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 AK3Q9UIJ7 227 aa7.6□□□□□ -1.19
TDP1-210ENST00000554976 OR5B21A6NL26 309 aa7.59□□□□□ -1.19
TDP1-210ENST00000554976 IL2RAP01589 272 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms