RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 OR5AC1P0C628 307 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 RPL7P18124 248 aaKnown RBP12.4□□□□□ -0.42
VTI1B-204ENST00000554659 KLF9Q13886 244 aaPredicted RBP12.4□□□□□ -0.42
VTI1B-204ENST00000554659 NPEPL1Q8NDH3 523 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 OR11H7Q8NGC8 314 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 ADAT1Q9BUB4 502 aaKnown RBP12.4□□□□□ -0.42
VTI1B-204ENST00000554659 MRPS18AQ9NVS2 196 aaKnown RBP12.4□□□□□ -0.42
VTI1B-204ENST00000554659 OPN4Q9UHM6 478 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 ERRFI1Q9UJM3 462 aaPredicted RBP12.4□□□□□ -0.42
VTI1B-204ENST00000554659 LSM2Q9Y333 95 aaKnown RBP12.4□□□□□ -0.42
VTI1B-204ENST00000554659 TPRP12270 2363 aaKnown RBP12.39□□□□□ -0.43
VTI1B-204ENST00000554659 IGHV5-51A0A0C4DH38 117 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 HYAL3O43820 417 aaPredicted RBP12.39□□□□□ -0.43
VTI1B-204ENST00000554659 CBLN3Q6UW01 205 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 GVQW1Q8N7I0 195 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 CADM4Q8NFZ8 388 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 WDR61Q9GZS3 305 aaKnown RBP12.39□□□□□ -0.43
VTI1B-204ENST00000554659 FRRS1LQ9P0K9 344 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 TMEM218A2RU14 115 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 FAM24AA6NFZ4 105 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 LRRC3CA6NJW4 275 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 RFC3P40938 356 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 SPCS3P61009 180 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 PRSS3P2Q8NHM4 247 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 TRMT61AQ96FX7 289 aaKnown RBP12.39□□□□□ -0.43
VTI1B-204ENST00000554659 FLRT3Q9NZU0 649 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 LPAR3Q9UBY5 353 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 CRHP06850 196 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 BMP5P22003 454 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 TMEM33P57088 247 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 SPATA46Q5T0L3 261 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 SEZ6L2Q6UXD5 910 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 MYPOPQ86VE0 399 aaPredicted RBP12.39□□□□□ -0.43
VTI1B-204ENST00000554659 C20orf196Q8IYI0 205 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 C10orf111Q8N326 155 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 UBALD1Q8TB05 177 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 PLPPR2Q96GM1 343 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 PECRQ9BY49 303 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 DLEC1Q9Y238 1755 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 C2CD4DB7Z1M9 353 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 DRD3P35462 400 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 C21orf62-AS1Q17RA5 79 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 MESTQ5EB52 335 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 WIPI1Q5MNZ9 446 aaPredicted RBP12.39□□□□□ -0.43
VTI1B-204ENST00000554659 ATG4DQ86TL0 474 aaPredicted RBP12.39□□□□□ -0.43
VTI1B-204ENST00000554659 OR10V1Q8NGI7 309 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 ASB10Q8WXI3 467 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 PTP4A1Q93096 173 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 TMPRSS13Q9BYE2 586 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 SLC2A9Q9NRM0 540 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 LAMB2P55268 1798 aa12.39□□□□□ -0.43
VTI1B-204ENST00000554659 A0A1W2PQD3 144 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 NGFP01138 241 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 CEACAM6P40199 344 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 GNB2P62879 340 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 ZNF774Q6NX45 483 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 OR1A1Q9P1Q5 309 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 TTC3P53804 2025 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 NCBP2LA6PVI3 153 aaKnown RBP12.38□□□□□ -0.43
VTI1B-204ENST00000554659 M0R143 59 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 RNPS1Q15287 305 aaKnown RBP12.38□□□□□ -0.43
VTI1B-204ENST00000554659 TMEM97Q5BJF2 176 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 TRAT1Q6PIZ9 186 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 OR2M5A3KFT3 312 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 M0R1X1 148 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 ZNF32P17041 273 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 P2RY1P47900 373 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 IL24Q13007 206 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 TDHQ8IZJ6 230 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 OR4D9Q8NGE8 314 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 OR1L4Q8NGR5 311 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 OR6X1Q8NH79 312 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 KISS1RQ969F8 398 aaPredicted RBP12.38□□□□□ -0.43
VTI1B-204ENST00000554659 ICAM5Q9UMF0 924 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 CDK5RAP2Q96SN8 1893 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 GATCO43716 136 aaKnown RBP12.38□□□□□ -0.43
VTI1B-204ENST00000554659 LPAR6P43657 344 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 TRA2AQ13595 282 aaKnown RBP eCLIP12.38□□□□□ -0.43
VTI1B-204ENST00000554659 NCMAPQ5T1S8 102 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 STRCQ7RTU9 1775 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 SCN9AQ15858 1988 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 ZNF785A8K8V0 405 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 PNRC1Q12796 327 aaPredicted RBP12.38□□□□□ -0.43
VTI1B-204ENST00000554659 IL11RAQ14626 422 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 PDCD1Q15116 288 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 LGALSLQ3ZCW2 172 aaPredicted RBP12.38□□□□□ -0.43
VTI1B-204ENST00000554659 STUMQ69YW2 141 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 BTNL3Q6UXE8 466 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 CLEC18BQ6UXF7 455 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 Q6ZN92 141 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 SLC25A42Q86VD7 318 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 NTMQ9P121 344 aa12.38□□□□□ -0.43
VTI1B-204ENST00000554659 A0A087X0M5 115 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 A0A1B0GX30 115 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 AP4M1O00189 453 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 ADAP1O75689 374 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 HTR1DP28221 377 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 HLA-DRB3P79483 266 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 ATP6V1FQ16864 119 aa12.37□□□□□ -0.43
VTI1B-204ENST00000554659 C17orf78Q8N4C9 275 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms