RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 ERVS71-1P61550 626 aa10.64□□□□□ -0.71
VDR-208ENST00000550325 LGI3Q8N145 548 aa10.64□□□□□ -0.71
VDR-208ENST00000550325 OR5C1Q8NGR4 320 aa10.64□□□□□ -0.71
VDR-208ENST00000550325 LIPHQ8WWY8 451 aa10.64□□□□□ -0.71
VDR-208ENST00000550325 FAAP24Q9BTP7 215 aa10.64□□□□□ -0.71
VDR-208ENST00000550325 UCK1Q9HA47 277 aa10.64□□□□□ -0.71
VDR-208ENST00000550325 FAM206AQ9NX38 181 aa10.64□□□□□ -0.71
VDR-208ENST00000550325 NCOR1O75376 2440 aa10.64□□□□□ -0.71
VDR-208ENST00000550325 PHF3Q92576 2039 aaKnown RBP10.64□□□□□ -0.71
VDR-208ENST00000550325 FOXS1O43638 330 aa10.64□□□□□ -0.71
VDR-208ENST00000550325 CNOT4O95628 575 aaKnown RBP10.64□□□□□ -0.71
VDR-208ENST00000550325 DUSP1P28562 367 aa10.64□□□□□ -0.71
VDR-208ENST00000550325 TAF9Q16594 264 aa10.64□□□□□ -0.71
VDR-208ENST00000550325 ZNF66Q6ZN08 573 aa10.64□□□□□ -0.71
VDR-208ENST00000550325 LHFPL1Q86WI0 220 aa10.64□□□□□ -0.71
VDR-208ENST00000550325 SLC35G3Q8N808 338 aa10.64□□□□□ -0.71
VDR-208ENST00000550325 THAP10Q9P2Z0 257 aaPredicted RBP10.64□□□□□ -0.71
VDR-208ENST00000550325 MYO7BQ6PIF6 2116 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 RP1P56715 2156 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 CLDN34H7C241 214 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 ANGPTL7O43827 346 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 MMP16P51512 607 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.63□□□□□ -0.71
VDR-208ENST00000550325 THNSL2Q86YJ6 484 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 YAF2Q8IY57 180 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 TSLPQ969D9 159 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 ELSPBP1Q96BH3 223 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 MCTS1Q9ULC4 181 aaKnown RBP10.63□□□□□ -0.71
VDR-208ENST00000550325 K7N7A8 449 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 RER1O15258 196 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 CXCL10P02778 98 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 OR1D4P47884 311 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 CHST11Q9NPF2 352 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 PITPNC1Q9UKF7 332 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 SPEGQ15772 3267 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 TNFSF14O43557 240 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 ADH1BP00325 375 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 AMBPP02760 352 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 DBHP09172 617 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 SLC6A8P48029 635 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 ZNF266Q14584 549 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 KISS1Q15726 138 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 ZNF776Q68DI1 518 aaPredicted RBP10.63□□□□□ -0.71
VDR-208ENST00000550325 WDFY1Q8IWB7 410 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 OR2C3Q8N628 320 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 OR8B12Q8NGG6 310 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 PGAM5Q96HS1 289 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 CBY1Q9Y3M2 126 aa10.63□□□□□ -0.71
VDR-208ENST00000550325 A0A1B0GWJ7 208 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 B4DGG1 531 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 IFNL4K9M1U5 179 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 CLRN1P58418 232 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 ICAM4Q14773 271 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 COL13A1Q5TAT6 717 aaPredicted RBP10.62□□□□□ -0.71
VDR-208ENST00000550325 NCR3LG1Q68D85 454 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 OR5AS1Q8N127 324 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 ARHGEF39Q8N4T4 335 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 MRPL43Q8N983 215 aaKnown RBP10.62□□□□□ -0.71
VDR-208ENST00000550325 YPEL4Q96NS1 127 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 TUBD1Q9UJT1 453 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.62□□□□□ -0.71
VDR-208ENST00000550325 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.62□□□□□ -0.71
VDR-208ENST00000550325 BCAT2O15382 392 aaPredicted RBP10.62□□□□□ -0.71
VDR-208ENST00000550325 SRSF10O75494 262 aaKnown RBP10.62□□□□□ -0.71
VDR-208ENST00000550325 MT-ATP6P00846 226 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 OR4A8P0C604 315 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 FAHP16930 419 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 POLR2HP52434 150 aaKnown RBP10.62□□□□□ -0.71
VDR-208ENST00000550325 H3F3AP84243 136 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 LBHQ53QV2 105 aaPredicted RBP10.62□□□□□ -0.71
VDR-208ENST00000550325 C16orf47Q6ZP98 133 aaPredicted RBP10.62□□□□□ -0.71
VDR-208ENST00000550325 LRRC18Q8N456 261 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 RNF133Q8WVZ7 376 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 UBE2J1Q9Y385 318 aaPredicted RBP10.62□□□□□ -0.71
VDR-208ENST00000550325 CRYM-AS1A6NIL9 109 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 CEBPZOSA8MTT3 80 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 IL33O95760 270 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 CELA2BP08218 269 aaPredicted RBP10.62□□□□□ -0.71
VDR-208ENST00000550325 SFTPCP11686 197 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 EPHA1P21709 976 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 CLN3Q13286 438 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 JOSD1Q15040 202 aaPredicted RBP10.62□□□□□ -0.71
VDR-208ENST00000550325 P2RY6Q15077 328 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 CCNL2Q96S94 520 aaPredicted RBP10.62□□□□□ -0.71
VDR-208ENST00000550325 WWTR1Q9GZV5 400 aa10.62□□□□□ -0.71
VDR-208ENST00000550325 PCNX3Q9H6A9 2034 aa10.61□□□□□ -0.71
VDR-208ENST00000550325 TDRD6O60522 2096 aaKnown RBP10.61□□□□□ -0.71
VDR-208ENST00000550325 A0A1W2PPQ1 181 aa10.61□□□□□ -0.71
VDR-208ENST00000550325 CTSDP07339 412 aaPredicted RBP10.61□□□□□ -0.71
VDR-208ENST00000550325 MYOGP15173 224 aa10.61□□□□□ -0.71
VDR-208ENST00000550325 ANOS1P23352 680 aa10.61□□□□□ -0.71
VDR-208ENST00000550325 COL10A1Q03692 680 aa10.61□□□□□ -0.71
VDR-208ENST00000550325 SHISA6Q6ZSJ9 500 aa10.61□□□□□ -0.71
VDR-208ENST00000550325 LYPD6Q86Y78 171 aa10.61□□□□□ -0.71
VDR-208ENST00000550325 SLC38A9Q8NBW4 561 aa10.61□□□□□ -0.71
VDR-208ENST00000550325 OR4X1Q8NH49 305 aa10.61□□□□□ -0.71
VDR-208ENST00000550325 SHDQ96IW2 340 aa10.61□□□□□ -0.71
VDR-208ENST00000550325 NOL4LQ96MY1 436 aaPredicted RBP10.61□□□□□ -0.71
VDR-208ENST00000550325 HIST1H2AAQ96QV6 131 aa10.61□□□□□ -0.71
VDR-208ENST00000550325 SNHG12Q9BXW3 62 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms