RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 FOXO1Q12778 655 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 SP6Q3SY56 376 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 SPATA46Q5T0L3 261 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 PDE4DIPQ5VU43 2346 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 ALX4Q9H161 411 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-209ENST00000545689 AMDHD2Q9Y303 409 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 WSB1Q9Y6I7 421 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 TAF1LQ8IZX4 1826 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 TRDCB7Z8K6 153 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 MASP2O00187 686 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 MPZL1O95297 269 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 ACTL6AO96019 429 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 MPLP40238 635 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 TPPP2P59282 170 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 TMEM88Q6PEY1 159 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 GINS3Q9BRX5 216 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 LINC00862A6NCI5 91 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 ONECUT2O95948 504 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 CRHP06850 196 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 OR5AC1P0C628 307 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 GABRA1P14867 456 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 MMP16P51512 607 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 MICBQ29980 383 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 OR5C1Q8NGR4 320 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 ADTRPQ96IZ2 230 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 C12orf57Q99622 126 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 ZNF345Q14585 488 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 SCMH1Q96GD3 660 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 LHX9Q9NQ69 397 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 CA10Q9NS85 328 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 FBXL17Q9UF56 701 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 ZNF320A2RRD8 509 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 CLDN34H7C241 214 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 TXNDC12O95881 172 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 CA6P23280 308 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 ACAA2P42765 397 aaKnown RBP11.08□□□□□ -0.64
COL4A6-209ENST00000545689 MAFAQ8NHW3 353 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-209ENST00000545689 TRAF4Q9BUZ4 470 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-209ENST00000545689 TMEM147Q9BVK8 224 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 ZDHHC11Q9H8X9 412 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 SLC45A2Q9UMX9 530 aa11.08□□□□□ -0.64
COL4A6-209ENST00000545689 IGF2P01344 180 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 FSTP19883 344 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 PMP22Q01453 160 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 FFAR4Q5NUL3 377 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 SFTPA1Q8IWL2 248 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 ASB5Q8WWX0 329 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 TMPRSS13Q9BYE2 586 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 CLEC18BQ6UXF7 455 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 GAL3ST2Q9H3Q3 398 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 GREB1LQ9C091 1923 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-209ENST00000545689 LIMS1P48059 325 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 FABP9Q0Z7S8 132 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 PNRC1Q12796 327 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-209ENST00000545689 TMEM211Q6ICI0 200 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 OR2Z1Q8NG97 314 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 GPX7Q96SL4 187 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-209ENST00000545689 OPN4Q9UHM6 478 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 TIMM9Q9Y5J7 89 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 C7orf66A4D0T2 115 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 MPV17LQ2QL34 196 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 CTDSP1Q9GZU7 261 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 A0A1W2PPQ1 181 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 C21orf140B9A014 251 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 TMEM267Q0VDI3 215 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-209ENST00000545689 TIPARPQ7Z3E1 657 aaKnown RBP11.07□□□□□ -0.64
COL4A6-209ENST00000545689 RNF2Q99496 336 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 TOLLIPQ9H0E2 274 aa11.07□□□□□ -0.64
COL4A6-209ENST00000545689 DUSP15Q9H1R2 295 aaPredicted RBP11.07□□□□□ -0.64
COL4A6-209ENST00000545689 TMEM265A0A087WTH1 108 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 DUXBA0A1W2PPF3 345 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 OR2M5A3KFT3 312 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 MAP1LC3B2A6NCE7 125 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 CLEC3BP05452 202 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 TMEM241Q24JQ0 296 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 FAM109BQ6ICB4 259 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-209ENST00000545689 LRRTM1Q86UE6 522 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 KLHDC1Q8N7A1 406 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 ZNF721Q8TF20 911 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 TGIF2Q9GZN2 237 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 MAP1LC3BQ9GZQ8 125 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 PLA2G3Q9NZ20 509 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 ETFDHQ16134 617 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 ZNF528Q3MIS6 628 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 LIAT1Q6ZQX7 453 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 BVESQ8NE79 360 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 SLC24A4Q8NFF2 622 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 MANBALQ9NQG1 85 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 DOCK5Q9H7D0 1870 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 PDZD11Q5EBL8 140 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 GVQW1Q8N7I0 195 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 SLC26A10Q8NG04 563 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 OR2M3Q8NG83 312 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 ATP5SQ99766 215 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 DSPPQ9NZW4 1301 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 IGHV3-64DA0A0J9YX35 117 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 A0A1B0GTQ1 180 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 LEUTXA8MZ59 168 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 H3BP45 60 aa11.06□□□□□ -0.64
COL4A6-209ENST00000545689 KRASP01116 189 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms