RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 GNALP38405 381 aa12.07□□□□□ -0.48
CLSTN3-216ENST00000545663 CDK5Q00535 292 aa12.07□□□□□ -0.48
CLSTN3-216ENST00000545663 GINS1Q14691 196 aa12.07□□□□□ -0.48
CLSTN3-216ENST00000545663 PLBD1Q6P4A8 553 aa12.07□□□□□ -0.48
CLSTN3-216ENST00000545663 SATL1Q86VE3 508 aa12.07□□□□□ -0.48
CLSTN3-216ENST00000545663 RPP25LQ8N5L8 163 aaKnown RBP12.07□□□□□ -0.48
CLSTN3-216ENST00000545663 CD177Q8N6Q3 437 aa12.07□□□□□ -0.48
CLSTN3-216ENST00000545663 OR4Q3Q8NH05 313 aa12.07□□□□□ -0.48
CLSTN3-216ENST00000545663 NDNFQ8TB73 568 aa12.07□□□□□ -0.48
CLSTN3-216ENST00000545663 SPTSSAQ969W0 71 aa12.07□□□□□ -0.48
CLSTN3-216ENST00000545663 RNFT2Q96EX2 444 aa12.07□□□□□ -0.48
CLSTN3-216ENST00000545663 SDSLQ96GA7 329 aa12.07□□□□□ -0.48
CLSTN3-216ENST00000545663 RBM14Q96PK6 669 aaKnown RBP12.07□□□□□ -0.48
CLSTN3-216ENST00000545663 CMC2Q9NRP2 79 aa12.07□□□□□ -0.48
CLSTN3-216ENST00000545663 CYB5R1Q9UHQ9 305 aa12.07□□□□□ -0.48
CLSTN3-216ENST00000545663 H0YJX3 145 aa12.06□□□□□ -0.48
CLSTN3-216ENST00000545663 OR2F2O95006 317 aa12.06□□□□□ -0.48
CLSTN3-216ENST00000545663 IGHV1-8P0DP01 117 aa12.06□□□□□ -0.48
CLSTN3-216ENST00000545663 GLRA1P23415 457 aa12.06□□□□□ -0.48
CLSTN3-216ENST00000545663 PRKXP51817 358 aa12.06□□□□□ -0.48
CLSTN3-216ENST00000545663 CDC42P60953 191 aa12.06□□□□□ -0.48
CLSTN3-216ENST00000545663 FAM3AP98173 230 aa12.06□□□□□ -0.48
CLSTN3-216ENST00000545663 PTGES3Q15185 160 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-216ENST00000545663 OGFRL1Q5TC84 451 aaPredicted RBP12.06□□□□□ -0.48
CLSTN3-216ENST00000545663 SLC16A9Q7RTY1 509 aa12.06□□□□□ -0.48
CLSTN3-216ENST00000545663 OR2AJ1Q8NGZ0 328 aa12.06□□□□□ -0.48
CLSTN3-216ENST00000545663 OR2T4Q8NH00 348 aa12.06□□□□□ -0.48
CLSTN3-216ENST00000545663 TRUB1Q8WWH5 349 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-216ENST00000545663 FN3KQ9H479 309 aa12.06□□□□□ -0.48
CLSTN3-216ENST00000545663 SMPD3Q9NY59 655 aaPredicted RBP12.06□□□□□ -0.48
CLSTN3-216ENST00000545663 B9D1Q9UPM9 204 aa12.06□□□□□ -0.48
CLSTN3-216ENST00000545663 ZAR1LA6NP61 321 aa12.05□□□□□ -0.48
CLSTN3-216ENST00000545663 RPLP1P05386 114 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-216ENST00000545663 SPNP16150 400 aa12.05□□□□□ -0.48
CLSTN3-216ENST00000545663 HIST1H1CP16403 213 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-216ENST00000545663 RPS27P42677 84 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-216ENST00000545663 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.05□□□□□ -0.48
CLSTN3-216ENST00000545663 SLX4IPQ5VYV7 408 aa12.05□□□□□ -0.48
CLSTN3-216ENST00000545663 CYB561A3Q8NBI2 242 aa12.05□□□□□ -0.48
CLSTN3-216ENST00000545663 ZNF555Q8NEP9 628 aa12.05□□□□□ -0.48
CLSTN3-216ENST00000545663 OR8D4Q8NGM9 314 aa12.05□□□□□ -0.48
CLSTN3-216ENST00000545663 OR8U1Q8NH10 309 aa12.05□□□□□ -0.48
CLSTN3-216ENST00000545663 OR4K13Q8NH42 304 aa12.05□□□□□ -0.48
CLSTN3-216ENST00000545663 MPZL2O60487 215 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 ZNF823P16415 610 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 OTX1P32242 354 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 DDOSTP39656 456 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 KIR2DS1Q14954 304 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 SNAPC1Q16533 368 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 SLC35F1Q5T1Q4 408 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 FAM27D1Q5T7N8 215 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 MINOS1Q5TGZ0 78 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 TTC23Q5W5X9 447 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 THAP5Q7Z6K1 395 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 SPSB4Q96A44 273 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 SGK3Q96BR1 496 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 HRASLS5Q96KN8 279 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 NMNAT3Q96T66 252 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 MICU1Q9BPX6 476 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 PAPOLGQ9BWT3 736 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 RIBC2Q9H4K1 309 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 IMPAD1Q9NX62 359 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 MINOS1-NBL1R4GNA1 71 aa12.04□□□□□ -0.48
CLSTN3-216ENST00000545663 RFPL4AA6NLU0 287 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 SNTNA6NMZ2 147 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 RFPL4AL1F8VTS6 287 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 ATP6V1G2O95670 118 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 PSKH1P11801 424 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 PEX2P28328 305 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 DCTDP32321 178 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 HSPA13P48723 471 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 ACTA2P62736 377 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 ACTG2P63267 376 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 ACTC1P68032 377 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 ACTA1P68133 377 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 SRSF7Q16629 238 aaKnown RBP eCLIP12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 KLHL12Q53G59 568 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 DRAM2Q6UX65 266 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 KCTD8Q6ZWB6 473 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 ZBTB46Q86UZ6 589 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 OR8J1Q8NGP2 316 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 CHPT1Q8WUD6 406 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 SLC29A1Q99808 456 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 APOL4Q9BPW4 351 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 H2AFY2Q9P0M6 372 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 KCNG2Q9UJ96 466 aa12.03□□□□□ -0.48
CLSTN3-216ENST00000545663 ZNF850A8MQ14 1090 aa12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 SLC16A6O15403 523 aa12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 PRODHO43272 600 aa12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 TBX1O43435 398 aa12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 MITFO75030 526 aaPredicted RBP12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 IGHV4-30-4P0DP06 118 aa12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 GP9P14770 177 aa12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 IL18R1Q13478 541 aa12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 LRRC36Q1X8D7 754 aa12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 SLC35D3Q5M8T2 416 aa12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 C12orf73Q69YU5 71 aa12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 SLC37A3Q8NCC5 494 aa12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 OR5P3Q8WZ94 311 aa12.02□□□□□ -0.49
CLSTN3-216ENST00000545663 RFKQ969G6 155 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms