RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PRSS42Q7Z5A4 293 aa11.33□□□□□ -0.6
CHD4-211ENST00000544484 OR13D1Q8NGV5 346 aa11.33□□□□□ -0.6
CHD4-211ENST00000544484 DLEC1Q9Y238 1755 aa11.33□□□□□ -0.6
CHD4-211ENST00000544484 TAGLNQ01995 201 aaKnown RBP11.33□□□□□ -0.6
CHD4-211ENST00000544484 BTNL8Q6UX41 500 aa11.33□□□□□ -0.6
CHD4-211ENST00000544484 ZDHHC22Q8N966 263 aa11.33□□□□□ -0.6
CHD4-211ENST00000544484 GPA33Q99795 319 aa11.33□□□□□ -0.6
CHD4-211ENST00000544484 SLC26A1Q9H2B4 701 aa11.33□□□□□ -0.6
CHD4-211ENST00000544484 ANKRD31Q8N7Z5 1873 aa11.33□□□□□ -0.6
CHD4-211ENST00000544484 A0A1W2PRD5 423 aa11.33□□□□□ -0.6
CHD4-211ENST00000544484 A0A1W2PRF3 423 aa11.33□□□□□ -0.6
CHD4-211ENST00000544484 A0A1W2PRM7 423 aa11.33□□□□□ -0.6
CHD4-211ENST00000544484 AGFG2O95081 481 aa11.33□□□□□ -0.6
CHD4-211ENST00000544484 C8orf82Q6P1X6 216 aaPredicted RBP11.33□□□□□ -0.6
CHD4-211ENST00000544484 OR5M8Q8NGP6 311 aa11.33□□□□□ -0.6
CHD4-211ENST00000544484 NEURL2Q9BR09 285 aa11.33□□□□□ -0.6
CHD4-211ENST00000544484 PRR13Q9NZ81 148 aa11.33□□□□□ -0.6
CHD4-211ENST00000544484 TRIM77I1YAP6 450 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 CHEK1O14757 476 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 GP1BAP07359 652 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 RAB32Q13637 225 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 HFEQ30201 348 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 WDR13Q9H1Z4 485 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 ENDOGQ14249 297 aaKnown RBP11.32□□□□□ -0.6
CHD4-211ENST00000544484 SLC22A18ASQ8N1D0 253 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 GPR87Q9BY21 358 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 RBM38Q9H0Z9 239 aaKnown RBP11.32□□□□□ -0.6
CHD4-211ENST00000544484 OR2D2Q9H210 308 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 MYOZ1Q9NP98 299 aaPredicted RBP11.32□□□□□ -0.6
CHD4-211ENST00000544484 TEX261Q6UWH6 196 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 CFHR5Q9BXR6 569 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 U3KQ87 197 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 RPL7L1Q6DKI1 246 aaKnown RBP11.32□□□□□ -0.6
CHD4-211ENST00000544484 LRFN3Q9BTN0 628 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 CABLES2Q9BTV7 478 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 HES4Q9HCC6 221 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 FOCADQ5VW36 1801 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 C9orf170A2RU37 121 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 VMA21Q3ZAQ7 101 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 AKR1E2Q96JD6 320 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 ICAM5Q9UMF0 924 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 A0A1W2PPQ1 181 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 NUDT19A8MXV4 375 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 SOCS1O15524 211 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 OR5AC1P0C628 307 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 ZNF770Q6IQ21 691 aaPredicted RBP11.32□□□□□ -0.6
CHD4-211ENST00000544484 ZBTB44Q8NCP5 570 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 OR51I2Q9H344 312 aa11.32□□□□□ -0.6
CHD4-211ENST00000544484 C3orf85A0A1B0GTC6 90 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 SFT2D2O95562 160 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 RPEQ96AT9 228 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 CLCF1Q9UBD9 225 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 DOCK3Q8IZD9 2030 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 COL5A3P25940 1745 aaPredicted RBP11.31□□□□□ -0.6
CHD4-211ENST00000544484 IGKV1-8A0A0C4DH67 115 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 RBP4P02753 201 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 TSPO2Q5TGU0 170 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 RHOFQ9HBH0 211 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 CACNA1IQ9P0X4 2223 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 ZNF318Q5VUA4 2279 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 COL11A2P13942 1736 aaPredicted RBP11.31□□□□□ -0.6
CHD4-211ENST00000544484 ZNF17P17021 662 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 OR6S1Q8NH40 331 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 FAM103A1Q9BTL3 118 aaKnown RBP11.31□□□□□ -0.6
CHD4-211ENST00000544484 RYDENQ9NUL5 291 aaKnown RBP11.31□□□□□ -0.6
CHD4-211ENST00000544484 RASL12Q9NYN1 266 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 CES1P1Q9UKY3 287 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 ARFGEF1Q9Y6D6 1849 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 CTDSP1Q9GZU7 261 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 CACNG5Q9UF02 275 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 FAM24AA6NFZ4 105 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 NCR3LG1Q68D85 454 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 MISP3Q96FF7 219 aa11.31□□□□□ -0.6
CHD4-211ENST00000544484 SLC31A2O15432 143 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 ADAP1O75689 374 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 WISP3O95389 354 aaPredicted RBP11.3□□□□□ -0.6
CHD4-211ENST00000544484 CYC1P08574 325 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 HIKESHIQ53FT3 197 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 ZBTB37Q5TC79 503 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 GGNBP1Q5YKI7 109 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 BTNL3Q6UXE8 466 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 MED30Q96HR3 178 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 PECRQ9BY49 303 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 TINAGQ9UJW2 476 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 TMED3Q9Y3Q3 217 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 TIMM9Q9Y5J7 89 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 OGG1O15527 345 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 IGKV1D-16P01601 117 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 CELA2AP08217 269 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 TGIF2Q9GZN2 237 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 CDIPTO14735 213 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 PAX6P26367 422 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 OR5C1Q8NGR4 320 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 APOBEC4Q8WW27 367 aaKnown RBP11.3□□□□□ -0.6
CHD4-211ENST00000544484 ZMIZ1Q9ULJ6 1067 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 PLXNB2O15031 1838 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 EPOPA6NHQ4 379 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 OPRK1P41145 380 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 FABP9Q0Z7S8 132 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 AANATQ16613 207 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms