RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 AMDHD2Q9Y303 409 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 C7orf77A4D0Y5 90 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 FAM24AA6NFZ4 105 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 YKT6O15498 198 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 ZNF205O95201 554 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 HLA-HP01893 362 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 IGKV3-11P04433 115 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 SERPINA7P05543 415 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 TRIM61Q5EBN2 209 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 C15orf54Q8N8G6 183 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 WNT2BQ93097 391 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 LHX4Q969G2 390 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 SLC2A8Q9NY64 477 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 OR5AC2Q9NZP5 309 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 WSB1Q9Y6I7 421 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 CASP8AP2Q9UKL3 1982 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 ONECUT2O95948 504 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 SPP1P10451 314 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 NFYBP25208 207 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 RPP30P78346 268 aaKnown RBP7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 ARF1P84077 181 aaKnown RBP7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 KCNIP4Q6PIL6 250 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 ZNF573Q86YE8 665 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 LRRC75AQ8NAA5 344 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 OR5C1Q8NGR4 320 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 FLVCR1-AS1Q8TAF5 88 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 VWCEQ96DN2 955 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 TECTBQ96PL2 329 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 CABLES2Q9BTV7 478 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 SLC26A1Q9H2B4 701 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 MYOZ1Q9NP98 299 aaPredicted RBP7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 G6PC2Q9NQR9 355 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 PPP1R3CQ9UQK1 317 aa7.23□□□□□ -1.25
PRKAB1-207ENST00000542698 TCF20Q9UGU0 1960 aaKnown RBP7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 ZNF705FA8MVS1 300 aaPredicted RBP7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 ZNF732B4DXR9 585 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 MFNGO00587 321 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 ARG1P05089 322 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 ZNF705DP0CH99 300 aaPredicted RBP7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 ZNF705BP0CI00 300 aaPredicted RBP7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 DAOP14920 347 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 ARG2P78540 354 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 BAXQ07812 192 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 WDR74Q6RFH5 385 aaPredicted RBP7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 MRPL41Q8IXM3 137 aaKnown RBP7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 ZDHHC23Q8IYP9 409 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 OR2V1Q8NHB1 315 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 C10orf35Q96D05 121 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 TVP23CQ96ET8 276 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 GFI1Q99684 422 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 EDEM2Q9BV94 578 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 RAB33BQ9H082 229 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 TOLLIPQ9H0E2 274 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 UBE2ZQ9H832 354 aaPredicted RBP7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 GAR1Q9NY12 217 aaKnown RBP7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 CNOT1A5YKK6 2376 aaKnown RBP7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 C3orf85A0A1B0GTC6 90 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 AQP7P3A6NL99 342 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 PPP5D1E7EU14 171 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 H7BYZ3 331 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 MT-CO2P00403 227 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 RD3LP0DJH9 198 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 EIF2S3P41091 472 aaKnown RBP7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 RAB4BP61018 213 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 SMAD4Q13485 552 aaKnown RBP7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 AWAT1Q58HT5 328 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 WIPI1Q5MNZ9 446 aaPredicted RBP7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 LIAT1Q6ZQX7 453 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 CNEP1R1Q8N9A8 125 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 ADPRHL1Q8NDY3 354 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 PLEKHA3Q9HB20 300 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 PARP11Q9NR21 331 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 SCN8AQ9UQD0 1980 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 FAM166BA8MTA8 275 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 TOX3O15405 576 aaPredicted RBP7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 CYB5BO43169 146 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 GRPP07492 148 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 CD46P15529 392 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 MUC1P15941 1255 aaPredicted RBP7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 RAC3P60763 192 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 POLR2GP62487 172 aaKnown RBP eCLIP7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 LTC4SQ16873 150 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 ZNF787Q6DD87 383 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 LYZL2Q7Z4W2 148 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 ZNF429Q86V71 674 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 OR5AS1Q8N127 324 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 VOPP1Q96AW1 172 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 THOC3Q96J01 351 aaKnown RBP7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 TIMP4Q99727 224 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 CHST5Q9GZS9 411 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 SLC2A9Q9NRM0 540 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 FAM206AQ9NX38 181 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 GNG12Q9UBI6 72 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 GAB2Q9UQC2 676 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 MPDZO75970 2070 aa7.22□□□□□ -1.25
PRKAB1-207ENST00000542698 A8MXE2 369 aa7.21□□□□□ -1.25
PRKAB1-207ENST00000542698 SEC11BP0C7V7 166 aa7.21□□□□□ -1.25
PRKAB1-207ENST00000542698 IAPPP10997 89 aa7.21□□□□□ -1.25
PRKAB1-207ENST00000542698 RCC1P18754 421 aaPredicted RBP7.21□□□□□ -1.25
PRKAB1-207ENST00000542698 FOXK1P85037 733 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms