RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PIMREGQ9BSJ6 248 aa19.4■□□□□ 0.7
HOMER3-205ENST00000542541 LIN7BQ9HAP6 207 aa19.4■□□□□ 0.7
HOMER3-205ENST00000542541 RBFOX1Q9NWB1 397 aaKnown RBP19.4■□□□□ 0.7
HOMER3-205ENST00000542541 WIPI2Q9Y4P8 454 aa19.4■□□□□ 0.7
HOMER3-205ENST00000542541 A6NHS1 94 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 C3orf80F5H4A9 247 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 F8VVB4 439 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 F8VWA3 439 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 WNT9BO14905 357 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 SLC2A2P11168 524 aaPredicted RBP19.39■□□□□ 0.69
HOMER3-205ENST00000542541 SERPINA2P20848 420 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 CD80P33681 288 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 SOX6P35712 828 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 RBMXP38159 391 aaKnown RBP19.39■□□□□ 0.69
HOMER3-205ENST00000542541 MDH2P40926 338 aaKnown RBP19.39■□□□□ 0.69
HOMER3-205ENST00000542541 CLDN12P56749 244 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 FAM201AQ5SY85 155 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 SHEQ5VZ18 495 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 TEX36Q5VZQ5 186 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 SFRP4Q6FHJ7 346 aaPredicted RBP19.39■□□□□ 0.69
HOMER3-205ENST00000542541 BATF2Q8N1L9 274 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 MUC20Q8N307 709 aaPredicted RBP19.39■□□□□ 0.69
HOMER3-205ENST00000542541 OR51D1Q8NGF3 324 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 OR10K1Q8NGX5 313 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 C10orf105Q8TEF2 133 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 C1orf147Q96MC9 270 aaPredicted RBP19.39■□□□□ 0.69
HOMER3-205ENST00000542541 HMG20AQ9NP66 347 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 NLKQ9UBE8 527 aa19.39■□□□□ 0.69
HOMER3-205ENST00000542541 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.38■□□□□ 0.69
HOMER3-205ENST00000542541 ZNF205O95201 554 aa19.38■□□□□ 0.69
HOMER3-205ENST00000542541 FGF12P61328 243 aa19.38■□□□□ 0.69
HOMER3-205ENST00000542541 C2orf76Q3KRA6 126 aa19.38■□□□□ 0.69
HOMER3-205ENST00000542541 Q5PR19 223 aa19.38■□□□□ 0.69
HOMER3-205ENST00000542541 DNM1P46Q6ZS02 220 aa19.38■□□□□ 0.69
HOMER3-205ENST00000542541 OR2W3Q7Z3T1 314 aa19.38■□□□□ 0.69
HOMER3-205ENST00000542541 LRRC28Q86X40 367 aaPredicted RBP19.38■□□□□ 0.69
HOMER3-205ENST00000542541 CRTAPO75718 401 aaPredicted RBP19.37■□□□□ 0.69
HOMER3-205ENST00000542541 IGHV2-70P01814 119 aa19.37■□□□□ 0.69
HOMER3-205ENST00000542541 VSIG8P0DPA2 414 aa19.37■□□□□ 0.69
HOMER3-205ENST00000542541 CALCBP10092 127 aa19.37■□□□□ 0.69
HOMER3-205ENST00000542541 PRKACAP17612 351 aa19.37■□□□□ 0.69
HOMER3-205ENST00000542541 SCAND1P57086 179 aa19.37■□□□□ 0.69
HOMER3-205ENST00000542541 ZMYND11Q15326 602 aa19.37■□□□□ 0.69
HOMER3-205ENST00000542541 SPIN3Q5JUX0 258 aa19.37■□□□□ 0.69
HOMER3-205ENST00000542541 OSR2Q8N2R0 312 aa19.37■□□□□ 0.69
HOMER3-205ENST00000542541 DEFB108BQ8NET1 73 aa19.37■□□□□ 0.69
HOMER3-205ENST00000542541 KCTD12Q96CX2 325 aaKnown RBP19.37■□□□□ 0.69
HOMER3-205ENST00000542541 TMEM165Q9HC07 324 aa19.37■□□□□ 0.69
HOMER3-205ENST00000542541 ABRACLQ9P1F3 81 aa19.37■□□□□ 0.69
HOMER3-205ENST00000542541 FBLN5Q9UBX5 448 aa19.37■□□□□ 0.69
HOMER3-205ENST00000542541 GLS2Q9UI32 602 aa19.37■□□□□ 0.69
HOMER3-205ENST00000542541 TANC2Q9HCD6 1990 aa19.37■□□□□ 0.69
HOMER3-205ENST00000542541 ISPDA4D126 451 aa19.36■□□□□ 0.69
HOMER3-205ENST00000542541 NDUFA2O43678 99 aa19.36■□□□□ 0.69
HOMER3-205ENST00000542541 KNG1P01042 644 aa19.36■□□□□ 0.69
HOMER3-205ENST00000542541 ZNF182P17025 639 aaPredicted RBP19.36■□□□□ 0.69
HOMER3-205ENST00000542541 AVPI1Q5T686 147 aa19.36■□□□□ 0.69
HOMER3-205ENST00000542541 OR51T1Q8NGJ9 327 aa19.36■□□□□ 0.69
HOMER3-205ENST00000542541 DYNC2LI1Q8TCX1 351 aa19.36■□□□□ 0.69
HOMER3-205ENST00000542541 AP3S1Q92572 193 aa19.36■□□□□ 0.69
HOMER3-205ENST00000542541 OR2AT4A6NND4 320 aa19.36■□□□□ 0.69
HOMER3-205ENST00000542541 MGMTP16455 207 aa19.36■□□□□ 0.69
HOMER3-205ENST00000542541 HOXA4Q00056 320 aaPredicted RBP19.36■□□□□ 0.69
HOMER3-205ENST00000542541 TMEM155Q4W5P6 130 aa19.36■□□□□ 0.69
HOMER3-205ENST00000542541 C19orf18Q8NEA5 215 aa19.36■□□□□ 0.69
HOMER3-205ENST00000542541 SEH1LQ96EE3 360 aa19.36■□□□□ 0.69
HOMER3-205ENST00000542541 BARHL1Q9BZE3 327 aa19.36■□□□□ 0.69
HOMER3-205ENST00000542541 BPESC1Q9GZL8 116 aa19.36■□□□□ 0.69
HOMER3-205ENST00000542541 IGHV3OR15-7A0A075B7D8 119 aa19.35■□□□□ 0.69
HOMER3-205ENST00000542541 TMEM14DPA8MWL7 114 aa19.35■□□□□ 0.69
HOMER3-205ENST00000542541 SLC25A16P16260 332 aa19.35■□□□□ 0.69
HOMER3-205ENST00000542541 FAM189A2Q15884 450 aa19.35■□□□□ 0.69
HOMER3-205ENST00000542541 ZNF404Q494X3 552 aa19.35■□□□□ 0.69
HOMER3-205ENST00000542541 NHLRC3Q5JS37 347 aa19.35■□□□□ 0.69
HOMER3-205ENST00000542541 FOXB2Q5VYV0 432 aa19.35■□□□□ 0.69
HOMER3-205ENST00000542541 SPICQ8N5J4 248 aa19.35■□□□□ 0.69
HOMER3-205ENST00000542541 TMEM104Q8NE00 496 aa19.35■□□□□ 0.69
HOMER3-205ENST00000542541 ACOT12Q8WYK0 555 aa19.35■□□□□ 0.69
HOMER3-205ENST00000542541 FAM46BQ96A09 425 aa19.35■□□□□ 0.69
HOMER3-205ENST00000542541 POM121Q96HA1 1249 aa19.35■□□□□ 0.69
HOMER3-205ENST00000542541 CCDC59Q9P031 241 aaKnown RBP19.35■□□□□ 0.69
HOMER3-205ENST00000542541 ST3GAL6Q9Y274 331 aa19.35■□□□□ 0.69
HOMER3-205ENST00000542541 ETV7Q9Y603 341 aa19.35■□□□□ 0.69
HOMER3-205ENST00000542541 MPIG6BO95866 241 aa19.34■□□□□ 0.69
HOMER3-205ENST00000542541 NR4A2P43354 598 aa19.34■□□□□ 0.69
HOMER3-205ENST00000542541 ART1P52961 327 aa19.34■□□□□ 0.69
HOMER3-205ENST00000542541 QRFPP83859 136 aa19.34■□□□□ 0.69
HOMER3-205ENST00000542541 DYNC1I2Q13409 638 aaKnown RBP19.34■□□□□ 0.69
HOMER3-205ENST00000542541 ZNF146Q15072 292 aa19.34■□□□□ 0.69
HOMER3-205ENST00000542541 OR5T2Q8NGG2 359 aa19.34■□□□□ 0.69
HOMER3-205ENST00000542541 PTX4Q96A99 478 aa19.34■□□□□ 0.69
HOMER3-205ENST00000542541 URM1Q9BTM9 101 aaKnown RBP19.34■□□□□ 0.69
HOMER3-205ENST00000542541 TMEM59Q9BXS4 323 aa19.34■□□□□ 0.69
HOMER3-205ENST00000542541 SELENOIQ9C0D9 397 aa19.34■□□□□ 0.69
HOMER3-205ENST00000542541 DNTTIP1Q9H147 329 aa19.34■□□□□ 0.69
HOMER3-205ENST00000542541 BANF2Q9H503 90 aa19.34■□□□□ 0.69
HOMER3-205ENST00000542541 SEBOXQ9HB31 216 aaPredicted RBP19.34■□□□□ 0.69
HOMER3-205ENST00000542541 OR5V1Q9UGF6 321 aa19.34■□□□□ 0.69
HOMER3-205ENST00000542541 RAB22AQ9UL26 194 aa19.34■□□□□ 0.69
HOMER3-205ENST00000542541 A0A0B4J203 849 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms