RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 FBP1P09467 338 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 HLA-GP17693 338 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 SUPT4H1P63272 117 aaKnown RBP12.86□□□□□ -0.35
DDX55-209ENST00000542286 ZXDAP98168 799 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 C3AR1Q16581 482 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 ZNF239Q16600 458 aaKnown RBP12.86□□□□□ -0.35
DDX55-209ENST00000542286 CEACAM16Q2WEN9 425 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 OR5H2Q8NGV7 314 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 RRNAD1Q96FB5 475 aaKnown RBP12.86□□□□□ -0.35
DDX55-209ENST00000542286 FAAP24Q9BTP7 215 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 PECRQ9BY49 303 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 CSAG2Q9Y5P2 127 aa12.86□□□□□ -0.35
DDX55-209ENST00000542286 A0A087WZY1 265 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 C19orf67A6NJJ6 358 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 CLN5O75503 358 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 ZNF14P17017 642 aaPredicted RBP12.85□□□□□ -0.35
DDX55-209ENST00000542286 AGAP20933 346 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 CCNOP22674 350 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 CPT2P23786 658 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 DCAF12Q5T6F0 453 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 AADACL3Q5VUY0 350 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 CLEC18BQ6UXF7 455 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 AAED1Q7RTV5 226 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 RSRP1Q9BUV0 290 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 CYTL1Q9NRR1 136 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 R4GN57 208 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 TEX13DA0A0J9YY54 714 aaPredicted RBP12.85□□□□□ -0.35
DDX55-209ENST00000542286 ZNF716A6NP11 495 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 ZNF587BE7ETH6 402 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 H0YIZ8 118 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 IL2RAP01589 272 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 CHRM2P08172 466 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 HOXB5P09067 269 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 PSMB6P28072 239 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 HTR5AP47898 357 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 CAV2P51636 162 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 NAAAQ02083 359 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 DTWD2Q8NBA8 298 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 OR56B1Q8NGI3 324 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 REEP6Q96HR9 211 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 SIGLEC12Q96PQ1 595 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 S100A13Q99584 98 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 RTBDNQ9BSG5 229 aaPredicted RBP12.85□□□□□ -0.35
DDX55-209ENST00000542286 CHST5Q9GZS9 411 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 CHMP1AQ9HD42 196 aaPredicted RBP12.85□□□□□ -0.35
DDX55-209ENST00000542286 LPAR3Q9UBY5 353 aa12.85□□□□□ -0.35
DDX55-209ENST00000542286 MSGN1A6NI15 193 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 FAM166BA8MTA8 275 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 IGLV3-1P01715 115 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 NQO2P16083 231 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 RCC1P18754 421 aaPredicted RBP12.84□□□□□ -0.35
DDX55-209ENST00000542286 PAX6P26367 422 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 HOXA6P31267 233 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 OR3A2P47893 321 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 ZNF84P51523 738 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 TGIF1Q15583 401 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 PIGYQ3MUY2 71 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 DRAM2Q6UX65 266 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 LINC00696Q6ZRV3 163 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 OR51F2Q8NH61 342 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 PSMF1Q92530 271 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 THOC3Q96J01 351 aaKnown RBP12.84□□□□□ -0.35
DDX55-209ENST00000542286 URM1Q9BTM9 101 aaKnown RBP12.84□□□□□ -0.35
DDX55-209ENST00000542286 LIME1Q9H400 295 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 SVILO95425 2214 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 MGAQ8IWI9 3026 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 DUSP3P51452 185 aaPredicted RBP12.84□□□□□ -0.35
DDX55-209ENST00000542286 PSG4Q00888 419 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 IGFBP7Q16270 282 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 C9orf152Q5JTZ5 239 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 ZDHHC22Q8N966 263 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 OR10C1Q96KK4 312 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 CRIM1Q9NZV1 1036 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 GSKIPQ9P0R6 139 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 V9GYS6 101 aa12.84□□□□□ -0.35
DDX55-209ENST00000542286 ZNF729A6NN14 1252 aaPredicted RBP12.83□□□□□ -0.36
DDX55-209ENST00000542286 AGPAT2O15120 278 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 OR8U8P0C7N1 319 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 RAC3P60763 192 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 FAM76BQ5HYJ3 339 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 OR2B11Q5JQS5 317 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 TCTEX1D2Q8WW35 142 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 RPS10P5Q9NQ39 176 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 GPR132Q9UNW8 380 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 C9orf172C9J069 976 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 C9JQL5 133 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 SYNGR3O43761 229 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 MT-ND4LP03901 98 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 CRHP06850 196 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 GSTP1P09211 210 aaKnown RBP12.83□□□□□ -0.36
DDX55-209ENST00000542286 OTX1P32242 354 aaPredicted RBP12.83□□□□□ -0.36
DDX55-209ENST00000542286 EIF2S3P41091 472 aaKnown RBP12.83□□□□□ -0.36
DDX55-209ENST00000542286 SSTP61278 116 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 ZNF92Q03936 586 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 FAM27BQ5VT28 67 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 VASH2Q86V25 355 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 HAS2Q92819 552 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 TMEM38BQ9NVV0 291 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 PLEKHJ1Q9NW61 149 aa12.83□□□□□ -0.36
DDX55-209ENST00000542286 OR5AC2Q9NZP5 309 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms