RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 USP24Q9UPU5 2620 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 ZNF816-ZNF321PA0A0X1KG74 233 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 G3V3Q6 166 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 TXNL1O43396 289 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 ECDO95905 644 aaPredicted RBP7.48□□□□□ -1.21
THBS3-210ENST00000541576 PRF1P14222 555 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 CNN3Q15417 329 aaKnown RBP7.48□□□□□ -1.21
THBS3-210ENST00000541576 PAN3Q58A45 887 aaKnown RBP7.48□□□□□ -1.21
THBS3-210ENST00000541576 LIN54Q6MZP7 749 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 PCSK4Q6UW60 755 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 OR56B2PQ8NGI1 322 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 HAVCR1Q96D42 359 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 SEC22AQ96IW7 307 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 MEMO1Q9Y316 297 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 SLC25A15Q9Y619 301 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 GGT3PA6NGU5 568 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 ZNF705EA8MWA4 302 aaPredicted RBP7.47□□□□□ -1.21
THBS3-210ENST00000541576 MCRIP1C9JLW8 97 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 F8W036 122 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 LDLRAD4O15165 306 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 CREBL2O60519 120 aaPredicted RBP7.47□□□□□ -1.21
THBS3-210ENST00000541576 SMPD2O60906 423 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 CDK2P24941 298 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 CA7P43166 264 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 PTH2RP49190 550 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 FAM27E3Q08E93 113 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 KISS1Q15726 138 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 TMEM42Q69YG0 159 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 AWAT2Q6E213 333 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 SEZ6L2Q6UXD5 910 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 BAIAP2L2Q6UXY1 529 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 RBMS3Q6XE24 437 aaKnown RBP7.47□□□□□ -1.21
THBS3-210ENST00000541576 BTN2A1Q7KYR7 527 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 FAM169BQ8N8A8 192 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 STEAP2Q8NFT2 490 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 SSC4DQ8WTU2 575 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 PIGTQ969N2 578 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 SPSB1Q96BD6 273 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 MUCL1Q96DR8 90 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 MRPS24Q96EL2 167 aaKnown RBP7.47□□□□□ -1.21
THBS3-210ENST00000541576 POFUT1Q9H488 388 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 HEATR1Q9H583 2144 aaKnown RBP7.47□□□□□ -1.21
THBS3-210ENST00000541576 NIT2Q9NQR4 276 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 CADP27708 2225 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 CACNA1BQ00975 2339 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 AGPAT2O15120 278 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 NRASP01111 189 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 IGLV1-44P01699 117 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 CECR9P0C854 216 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 C4BPBP20851 252 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 RBM39Q14498 530 aaKnown RBP7.47□□□□□ -1.21
THBS3-210ENST00000541576 GUCA2BQ16661 112 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 DCAF12L2Q5VW00 463 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 UNQ6126/PRO20091Q6UXV3 157 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 ANGPTL5Q86XS5 388 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 PNLDC1Q8NA58 520 aaKnown RBP7.47□□□□□ -1.21
THBS3-210ENST00000541576 PIGCQ92535 297 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 HRASLSQ9HDD0 168 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 ELOVL5Q9NYP7 299 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 AUP1Q9Y679 476 aa7.47□□□□□ -1.21
THBS3-210ENST00000541576 CCSO14618 274 aa7.46□□□□□ -1.21
THBS3-210ENST00000541576 BPNT1O95861 308 aa7.46□□□□□ -1.21
THBS3-210ENST00000541576 OR3A4PP47883 348 aa7.46□□□□□ -1.21
THBS3-210ENST00000541576 LUMP51884 338 aaPredicted RBP7.46□□□□□ -1.21
THBS3-210ENST00000541576 UCP2P55851 309 aa7.46□□□□□ -1.21
THBS3-210ENST00000541576 SEC61A1P61619 476 aaKnown RBP7.46□□□□□ -1.21
THBS3-210ENST00000541576 SPATA46Q5T0L3 261 aa7.46□□□□□ -1.21
THBS3-210ENST00000541576 ALKBH2Q6NS38 261 aa7.46□□□□□ -1.21
THBS3-210ENST00000541576 CSNK2A3Q8NEV1 391 aa7.46□□□□□ -1.21
THBS3-210ENST00000541576 OR1S1Q8NH92 325 aa7.46□□□□□ -1.21
THBS3-210ENST00000541576 TECTBQ96PL2 329 aa7.46□□□□□ -1.21
THBS3-210ENST00000541576 C7orf50Q9BRJ6 194 aaKnown RBP7.46□□□□□ -1.21
THBS3-210ENST00000541576 ZNF230Q9UIE0 474 aaPredicted RBP7.46□□□□□ -1.21
THBS3-210ENST00000541576 OSGIN2Q9Y236 505 aa7.46□□□□□ -1.21
THBS3-210ENST00000541576 MRPS28Q9Y2Q9 187 aaKnown RBP7.46□□□□□ -1.21
THBS3-210ENST00000541576 DIDO1Q9BTC0 2240 aaKnown RBP7.46□□□□□ -1.21
THBS3-210ENST00000541576 IGHV1-18A0A0C4DH31 117 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 UBE2QL1A1L167 161 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 CD300LBA8K4G0 201 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 CTAG2O75638 210 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 PPP1CBP62140 327 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 POLR2GP62487 172 aaKnown RBP eCLIP7.46□□□□□ -1.22
THBS3-210ENST00000541576 QRFPP83859 136 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 PITPNAQ00169 270 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 PPA1Q15181 289 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 HFEQ30201 348 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 TMEM69Q5SWH9 247 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 PLCXD3Q63HM9 321 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 RAB12Q6IQ22 244 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 GLIPR1L1Q6UWM5 242 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 WBP1Q96G27 269 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 C1orf147Q96MC9 270 aaPredicted RBP7.46□□□□□ -1.22
THBS3-210ENST00000541576 PDCD10Q9BUL8 212 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 PAPOLGQ9BWT3 736 aaKnown RBP7.46□□□□□ -1.22
THBS3-210ENST00000541576 TREM1Q9NP99 234 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 CRIM1Q9NZV1 1036 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 JKAMPQ9P055 326 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 KIF25Q9UIL4 384 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 SLC7A11Q9UPY5 501 aa7.46□□□□□ -1.22
THBS3-210ENST00000541576 IGSF10Q6WRI0 2623 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms