RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 FBXO46Q6PJ61 603 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 TRMT61AQ96FX7 289 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 DECR2Q9NUI1 292 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 ICAM5Q9UMF0 924 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 ZNF835Q9Y2P0 537 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 CNIH1O95406 144 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 HLA-DRB5Q30154 266 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 COL5A1-AS1Q5SY13 56 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 TRAT1Q6PIZ9 186 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 SLC25A22Q9H936 323 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 SLC2A9Q9NRM0 540 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 KIAA1456Q9P272 454 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 SIPA1L3O60292 1781 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 B4GALT1P15291 398 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 FAM3BP58499 235 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 DMWDQ09019 674 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 ZNF362Q5T0B9 420 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 DYRK2Q92630 601 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 C12orf49Q9H741 205 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 SLC52A3Q9NQ40 469 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 CXCL13O43927 109 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 PIAS2O75928 621 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 POLR2GP62487 172 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 INSM1Q01101 510 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 FMODQ06828 376 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 NHLRC3Q5JS37 347 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 ALG14Q96F25 216 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 FOXB1Q99853 325 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 PRRC2BQ5JSZ5 2229 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 ABCA3Q99758 1704 aa13.3□□□□□ -0.28
SMARCA4-207ENST00000541122 PLPP3O14495 311 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 NRG2O14511 850 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 CBR3O75828 277 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 GCGP01275 180 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 FOXO1Q12778 655 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 MYBPHQ13203 477 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 TMEM97Q5BJF2 176 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 ZNF552Q9H707 407 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 STARD10Q9Y365 291 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 M0R1X1 148 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 NAT2P11245 290 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 MUC1P15941 1255 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 CTLA4P16410 223 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 LPAR6P43657 344 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 EWSR1Q01844 656 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■□□□ 14.1
SMARCA4-207ENST00000541122 SCCPDHQ8NBX0 429 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 ERRFI1Q9UJM3 462 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 MMP17Q9ULZ9 603 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 DMRT1Q9Y5R6 373 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 TAF1P21675 1872 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 VSIG10L2P0DP72 767 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 DSCR4P56555 118 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 CCL4L1Q8NHW4 92 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 SYNGR2O43760 224 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 LINC01555Q8NAE3 123 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 OR11G2Q8NGC1 345 aa13.29□□□□□ -0.28
SMARCA4-207ENST00000541122 LINC01387J3KSC0 135 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 PDE6DO43924 150 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 NDUFB7P17568 137 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 KIR2DS2P43631 304 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 CPEB3Q8NE35 698 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 SPACA9Q96E40 222 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 RNF2Q99496 336 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 TMEM167BQ9NRX6 74 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 TIMM9Q9Y5J7 89 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 USP54Q70EL1 1684 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 GON4LQ3T8J9 2241 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 PMS2P1A4D2B8 440 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 GYPAP02724 150 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 FGF2P09038 288 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 PAFAH1B2P68402 229 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 NHLH1Q02575 133 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 NHLH2Q02577 135 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 TMEM215Q68D42 235 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 OR2V1Q8NHB1 315 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 C6orf106Q9H6K1 298 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 ZFP64Q9NPA5 681 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 MRPS2Q9Y399 296 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 GEMIN2O14893 280 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 CIDEAO60543 219 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 TTRP02766 147 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 FGF8P55075 233 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 OR2A5Q96R48 311 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 GOLT1BQ9Y3E0 138 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 MED19A0JLT2 244 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 MICBQ29980 383 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 STARD4Q96DR4 205 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 ADAT1Q9BUB4 502 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 ZNF355PQ9NSJ1 428 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 TAAR3PQ9P1P4 343 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 FUT9Q9Y231 359 aa13.28□□□□□ -0.28
SMARCA4-207ENST00000541122 ZNF253O75346 499 aa13.27□□□□□ -0.28
SMARCA4-207ENST00000541122 DEDDO75618 318 aa13.27□□□□□ -0.28
SMARCA4-207ENST00000541122 CD99P14209 185 aa13.27□□□□□ -0.28
SMARCA4-207ENST00000541122 PPP2CBP62714 309 aa13.27□□□□□ -0.28
SMARCA4-207ENST00000541122 PPP2CAP67775 309 aa13.27□□□□□ -0.28
SMARCA4-207ENST00000541122 MRPL24Q96A35 216 aaKnown RBP13.27□□□□□ -0.28
SMARCA4-207ENST00000541122 LRRC3BQ96PB8 259 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms