RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 T-ENOLP0DO92 83 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 CXCR4P61073 352 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 ACTA2P62736 377 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 ACTG2P63267 376 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 ACTC1P68032 377 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 ACTA1P68133 377 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 CD83Q01151 205 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 DYNC1I2Q13409 638 aaKnown RBP9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 ARSJQ5FYB0 599 aaPredicted RBP9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 FOXB2Q5VYV0 432 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 ZBTB49Q6ZSB9 765 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 MEPCEQ7L2J0 689 aaKnown RBP9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 C16orf82Q7Z2V1 217 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 ANGPTL5Q86XS5 388 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 SLC35F2Q8IXU6 374 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 BATF2Q8N1L9 274 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 CCDC54Q8NEL0 328 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 CEP19Q96LK0 163 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 APOL4Q9BPW4 351 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 OCSTAMPQ9BR26 566 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 TTTY10Q9BZA0 68 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 PAPOLBQ9NRJ5 636 aaKnown RBP9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 SLC7A11Q9UPY5 501 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 LINC00312Q9Y6C7 94 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 SESN1Q9Y6P5 492 aa9.65□□□□□ -0.86
CBX3P4-202ENST00000540428 IGHV2-26A0A0B4J1V2 119 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 ZNF670-ZNF695F2Z2N8 137 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 CD33P20138 364 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 FUT6P51993 359 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 BLCAPP62952 87 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 CBX1P83916 185 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 IL18R1Q13478 541 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 PTGES3Q15185 160 aaKnown RBP9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 NXNL2Q5VZ03 156 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 TCF23Q7RTU1 214 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 Q8IYB0 196 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 ZNF676Q8N7Q3 588 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 AKR1E2Q96JD6 320 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 OR5M11Q96RB7 305 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 PLEKHA1Q9HB21 404 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 ADGRL4Q9HBW9 690 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 CLN6Q9NWW5 311 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 MTCH1Q9NZJ7 389 aa9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 H2AFY2Q9P0M6 372 aaPredicted RBP9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 MRM2Q9UI43 246 aaKnown RBP9.64□□□□□ -0.87
CBX3P4-202ENST00000540428 FAM230AA0A1W2PPH8 454 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 TMEM82A0PJX8 343 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 A6NIN4 97 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 PRKYO43930 277 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 FKBP6O75344 327 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 GATBO75879 557 aaKnown RBP9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 PEX2P28328 305 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 EFNB1P98172 346 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 SLC34A1Q06495 639 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 AADACL4Q5VUY2 407 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 SLX4IPQ5VYV7 408 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 FAHD1Q6P587 224 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 Q6ZS46 218 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 ENTHD1Q8IYW4 607 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 OR5AU1Q8NGC0 362 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 TRMT10AQ8TBZ6 339 aaKnown RBP9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 C10orf35Q96D05 121 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 THTPAQ9BU02 230 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 CLEC7AQ9BXN2 247 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 CADM1Q9BY67 442 aaKnown RBP9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 CHST5Q9GZS9 411 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 TMEM133Q9H2Q1 129 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 HILPDAQ9Y5L2 63 aa9.63□□□□□ -0.87
CBX3P4-202ENST00000540428 IGKV1-27A0A075B6S5 117 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 F8VVB4 439 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 F8VWA3 439 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 MAGEB4O15481 346 aaPredicted RBP9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 SYT7O43581 403 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 DUS4LO95620 317 aaKnown RBP9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 FAM107AO95990 144 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 HAND1O96004 215 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 SERPINA3P01011 423 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 PF4V1P10720 104 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 IGLL1P15814 213 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 HTR1DP28221 377 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 ERP29P30040 261 aaKnown RBP9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 DAPP51397 102 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 GYS2P54840 703 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 SLC35A2P78381 396 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 EDDM3AQ14507 147 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 UBE2V2Q15819 145 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 GRK1Q15835 563 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 TMEM95Q3KNT9 176 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 PLEKHG7Q6ZR37 379 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 SPATA24Q86W54 205 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 CATSPERDQ86XM0 798 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 EGFL6Q8IUX8 553 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 GID4Q8IVV7 300 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 OR4P4Q8NGL7 312 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 NDNFQ8TB73 568 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 TMEM163Q8TC26 289 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 BORCS8Q96FH0 119 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 LIN7BQ9HAP6 207 aa9.62□□□□□ -0.87
CBX3P4-202ENST00000540428 TSSC4Q9Y5U2 329 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms