RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 SLCO5A1Q9H2Y9 848 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 FAM86C1Q9NVL1 165 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 TIMM10BQ9Y5J6 103 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 CSAG2Q9Y5P2 127 aa9.33□□□□□ -0.92
CLIP1-210ENST00000538120 A0A1W2PP11 408 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 TMEM218A2RU14 115 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 METTL21EPA6NDL7 271 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 SYNGR4O95473 234 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 ACTL6AO96019 429 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 CD74P04233 296 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 HCKP08631 526 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 SLC25A4P12235 298 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 FOXG1P55316 489 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-210ENST00000538120 HFEQ30201 348 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 ACOT7LQ6ZUV0 252 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 SLC16A14Q7RTX9 510 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 TMPRSS7Q7RTY8 843 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 C1QL2Q7Z5L3 287 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 FAM219AQ8IW50 185 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 OR2AE1Q8NHA4 323 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 ASB13Q8WXK3 278 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 OR10A2Q9H208 303 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 TMEM231Q9H6L2 316 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 CALHM2Q9HA72 323 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 BCO1Q9HAY6 547 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 PIGLQ9Y2B2 252 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 A0A1B0GW55 424 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 ZNF98A6NK75 572 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 DUX4L2P0CJ85 424 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 DUX4L3P0CJ86 424 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 DUX4L4P0CJ87 422 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 DUX4L5P0CJ88 424 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 DUX4L6P0CJ89 424 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 DUX4L7P0CJ90 424 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 ACKR3P25106 362 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 ARF1P84077 181 aaKnown RBP9.32□□□□□ -0.92
CLIP1-210ENST00000538120 SRSF4Q08170 494 aaKnown RBP9.32□□□□□ -0.92
CLIP1-210ENST00000538120 SLC10A1Q14973 349 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 ZNF766Q5HY98 468 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 FAM209BQ5JX69 171 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 FJX1Q86VR8 437 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 NUDCD2Q8WVJ2 157 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 CHST5Q9GZS9 411 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 DEFB127Q9H1M4 99 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 PIGMQ9H3S5 423 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 RNF122Q9H9V4 155 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 DUX4Q9UBX2 424 aa9.32□□□□□ -0.92
CLIP1-210ENST00000538120 KLF2Q9Y5W3 355 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-210ENST00000538120 C9orf170A2RU37 121 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 OR2AT4A6NND4 320 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 ZNF724A8MTY0 619 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 RPL36A-HNRNPH2H7BZ11 118 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 CDC14BO60729 498 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 PGAM2P15259 253 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 HTR5AP47898 357 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 RRADP55042 308 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 ARG2P78540 354 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 KISS1Q15726 138 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 PLEKHN1Q494U1 663 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-210ENST00000538120 SLC22A25Q6T423 547 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 LYG2Q86SG7 212 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 ZNF584Q8IVC4 421 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 ZNF101Q8IZC7 436 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 ZBTB34Q8NCN2 500 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 CCDC54Q8NEL0 328 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 OR10R2Q8NGX6 335 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 NPRL2Q8WTW4 380 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 PP6455Q8WZ26 134 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 SELENOIQ9C0D9 397 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 ESRP2Q9H6T0 727 aaKnown RBP9.31□□□□□ -0.92
CLIP1-210ENST00000538120 FN3KRPQ9HA64 309 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 SPRR3Q9UBC9 169 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 MCTS1Q9ULC4 181 aaKnown RBP9.31□□□□□ -0.92
CLIP1-210ENST00000538120 H7C2Y5 167 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 SSX5O60225 188 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 GNB3P16520 340 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 AKR1C4P17516 323 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 PCBD1P61457 104 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 IL13RA1P78552 427 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 NRN1LQ496H8 165 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 PLAC9Q5JTB6 97 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 SLC25A42Q86VD7 318 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 CHST4Q8NCG5 386 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 BHLHE23Q8NDY6 225 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 CPEB3Q8NE35 698 aaKnown RBP9.31□□□□□ -0.92
CLIP1-210ENST00000538120 OR5AP2Q8NGF4 316 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 OR5T2Q8NGG2 359 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 NANOS1Q8WY41 292 aaKnown RBP9.31□□□□□ -0.92
CLIP1-210ENST00000538120 C10orf35Q96D05 121 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 WDYHV1Q96HA8 205 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 REEP6Q96HR9 211 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 TLNRD1Q9H1K6 362 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 BANF2Q9H503 90 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 MYOZ1Q9NP98 299 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-210ENST00000538120 PARPBPQ9NWS1 579 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 MLXQ9UH92 298 aa9.31□□□□□ -0.92
CLIP1-210ENST00000538120 EP300Q09472 2414 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-210ENST00000538120 C13orf42A0A1B0GVH6 325 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 SOCS1O15524 211 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 MPIG6BO95866 241 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms